1 | /** |
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2 | * @file szd_float.c |
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3 | * @author Sheng Di and Dingwen Tao |
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4 | * @date Aug, 2016 |
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5 | * @brief |
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6 | * (C) 2016 by Mathematics and Computer Science (MCS), Argonne National Laboratory. |
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7 | * See COPYRIGHT in top-level directory. |
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8 | */ |
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9 | |
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10 | #include <stdlib.h> |
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11 | #include <stdio.h> |
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12 | #include <string.h> |
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13 | #include "szd_float.h" |
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14 | #include "TightDataPointStorageF.h" |
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15 | #include "sz.h" |
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16 | #include "Huffman.h" |
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17 | #include "szd_float_pwr.h" |
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18 | #include "szd_float_ts.h" |
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19 | |
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20 | /** |
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21 | * |
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22 | * |
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23 | * @return status SUCCESSFUL (SZ_SCES) or not (other error codes) f |
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24 | * */ |
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25 | int SZ_decompress_args_float(float** newData, size_t r5, size_t r4, size_t r3, size_t r2, size_t r1, unsigned char* cmpBytes, size_t cmpSize) |
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26 | { |
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27 | int status = SZ_SCES; |
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28 | size_t dataLength = computeDataLength(r5,r4,r3,r2,r1); |
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29 | |
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30 | //unsigned char* tmpBytes; |
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31 | size_t targetUncompressSize = dataLength <<2; //i.e., *4 |
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32 | //tmpSize must be "much" smaller than dataLength |
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33 | size_t i, tmpSize = 8+MetaDataByteLength+exe_params->SZ_SIZE_TYPE; |
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34 | unsigned char* szTmpBytes; |
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35 | |
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36 | if(cmpSize!=8+4+MetaDataByteLength && cmpSize!=8+8+MetaDataByteLength) //4,8 means two posibilities of SZ_SIZE_TYPE |
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37 | { |
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38 | int isZlib = isZlibFormat(cmpBytes[0], cmpBytes[1]); |
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39 | if(confparams_dec->szMode!=SZ_TEMPORAL_COMPRESSION) |
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40 | { |
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41 | if(isZlib) |
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42 | confparams_dec->szMode = SZ_BEST_COMPRESSION; |
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43 | else |
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44 | confparams_dec->szMode = SZ_BEST_SPEED; |
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45 | } |
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46 | |
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47 | if(confparams_dec->szMode==SZ_BEST_SPEED) |
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48 | { |
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49 | tmpSize = cmpSize; |
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50 | szTmpBytes = cmpBytes; |
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51 | } |
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52 | else if(confparams_dec->szMode==SZ_BEST_COMPRESSION || confparams_dec->szMode==SZ_DEFAULT_COMPRESSION || confparams_dec->szMode==SZ_TEMPORAL_COMPRESSION) |
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53 | { |
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54 | if(targetUncompressSize<MIN_ZLIB_DEC_ALLOMEM_BYTES) //Considering the minimum size |
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55 | targetUncompressSize = MIN_ZLIB_DEC_ALLOMEM_BYTES; |
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56 | tmpSize = zlib_uncompress5(cmpBytes, (unsigned long)cmpSize, &szTmpBytes, (unsigned long)targetUncompressSize+4+MetaDataByteLength+exe_params->SZ_SIZE_TYPE);// (unsigned long)targetUncompressSize+8: consider the total length under lossless compression mode is actually 3+4+1+targetUncompressSize |
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57 | //szTmpBytes = (unsigned char*)malloc(sizeof(unsigned char)*tmpSize); |
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58 | //memcpy(szTmpBytes, tmpBytes, tmpSize); |
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59 | //free(tmpBytes); //release useless memory |
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60 | } |
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61 | else |
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62 | { |
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63 | printf("Wrong value of confparams_dec->szMode in the double compressed bytes.\n"); |
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64 | status = SZ_MERR; |
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65 | return status; |
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66 | } |
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67 | } |
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68 | else |
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69 | szTmpBytes = cmpBytes; |
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70 | //TODO: convert szTmpBytes to data array. |
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71 | TightDataPointStorageF* tdps; |
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72 | int errBoundMode = new_TightDataPointStorageF_fromFlatBytes(&tdps, szTmpBytes, tmpSize); |
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73 | |
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74 | //writeByteData(tdps->typeArray, tdps->typeArray_size, "decompress-typebytes.tbt"); |
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75 | int dim = computeDimension(r5,r4,r3,r2,r1); |
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76 | int floatSize = sizeof(float); |
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77 | if(tdps->isLossless) |
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78 | { |
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79 | *newData = (float*)malloc(floatSize*dataLength); |
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80 | if(sysEndianType==BIG_ENDIAN_SYSTEM) |
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81 | { |
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82 | memcpy(*newData, szTmpBytes+4+MetaDataByteLength+exe_params->SZ_SIZE_TYPE, dataLength*floatSize); |
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83 | } |
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84 | else |
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85 | { |
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86 | unsigned char* p = szTmpBytes+4+MetaDataByteLength+exe_params->SZ_SIZE_TYPE; |
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87 | for(i=0;i<dataLength;i++,p+=floatSize) |
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88 | (*newData)[i] = bytesToFloat(p); |
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89 | } |
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90 | } |
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91 | else if (dim == 1) |
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92 | getSnapshotData_float_1D(newData,r1,tdps, errBoundMode); |
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93 | else |
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94 | if (dim == 2) |
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95 | getSnapshotData_float_2D(newData,r2,r1,tdps, errBoundMode); |
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96 | else |
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97 | if (dim == 3) |
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98 | getSnapshotData_float_3D(newData,r3,r2,r1,tdps, errBoundMode); |
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99 | else |
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100 | if (dim == 4) |
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101 | getSnapshotData_float_4D(newData,r4,r3,r2,r1,tdps, errBoundMode); |
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102 | else |
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103 | { |
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104 | printf("Error: currently support only at most 4 dimensions!\n"); |
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105 | status = SZ_DERR; |
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106 | } |
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107 | free_TightDataPointStorageF2(tdps); |
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108 | if(confparams_dec->szMode!=SZ_BEST_SPEED && cmpSize!=8+MetaDataByteLength+exe_params->SZ_SIZE_TYPE) |
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109 | free(szTmpBytes); |
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110 | return status; |
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111 | } |
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112 | |
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113 | void decompressDataSeries_float_1D(float** data, size_t dataSeriesLength, TightDataPointStorageF* tdps) |
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114 | { |
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115 | updateQuantizationInfo(tdps->intervals); |
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116 | size_t i, j, k = 0, p = 0, l = 0; // k is to track the location of residual_bit |
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117 | // in resiMidBits, p is to track the |
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118 | // byte_index of resiMidBits, l is for |
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119 | // leadNum |
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120 | unsigned char* leadNum; |
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121 | double interval = tdps->realPrecision*2; |
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122 | |
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123 | convertByteArray2IntArray_fast_2b(tdps->exactDataNum, tdps->leadNumArray, tdps->leadNumArray_size, &leadNum); |
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124 | |
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125 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
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126 | |
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127 | int* type = (int*)malloc(dataSeriesLength*sizeof(int)); |
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128 | |
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129 | HuffmanTree* huffmanTree = createHuffmanTree(tdps->stateNum); |
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130 | decode_withTree(huffmanTree, tdps->typeArray, dataSeriesLength, type); |
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131 | SZ_ReleaseHuffman(huffmanTree); |
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132 | |
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133 | unsigned char preBytes[4]; |
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134 | unsigned char curBytes[4]; |
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135 | |
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136 | memset(preBytes, 0, 4); |
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137 | |
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138 | size_t curByteIndex = 0; |
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139 | int reqBytesLength, resiBitsLength, resiBits; |
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140 | unsigned char leadingNum; |
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141 | float medianValue, exactData, predValue; |
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142 | |
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143 | reqBytesLength = tdps->reqLength/8; |
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144 | resiBitsLength = tdps->reqLength%8; |
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145 | medianValue = tdps->medianValue; |
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146 | |
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147 | int type_; |
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148 | for (i = 0; i < dataSeriesLength; i++) { |
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149 | type_ = type[i]; |
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150 | switch (type_) { |
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151 | case 0: |
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152 | // compute resiBits |
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153 | resiBits = 0; |
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154 | if (resiBitsLength != 0) { |
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155 | int kMod8 = k % 8; |
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156 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
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157 | if (rightMovSteps > 0) { |
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158 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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159 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
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160 | } else if (rightMovSteps < 0) { |
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161 | int code1 = getLeftMovingCode(kMod8); |
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162 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
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163 | int leftMovSteps = -rightMovSteps; |
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164 | rightMovSteps = 8 - leftMovSteps; |
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165 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
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166 | p++; |
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167 | resiBits = resiBits |
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168 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
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169 | } else // rightMovSteps == 0 |
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170 | { |
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171 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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172 | resiBits = (tdps->residualMidBits[p] & code); |
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173 | p++; |
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174 | } |
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175 | k += resiBitsLength; |
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176 | } |
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177 | |
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178 | // recover the exact data |
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179 | memset(curBytes, 0, 4); |
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180 | leadingNum = leadNum[l++]; |
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181 | memcpy(curBytes, preBytes, leadingNum); |
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182 | for (j = leadingNum; j < reqBytesLength; j++) |
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183 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
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184 | if (resiBitsLength != 0) { |
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185 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
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186 | curBytes[reqBytesLength] = resiByte; |
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187 | } |
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188 | |
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189 | exactData = bytesToFloat(curBytes); |
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190 | (*data)[i] = exactData + medianValue; |
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191 | memcpy(preBytes,curBytes,4); |
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192 | break; |
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193 | default: |
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194 | //predValue = 2 * (*data)[i-1] - (*data)[i-2]; |
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195 | predValue = (*data)[i-1]; |
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196 | (*data)[i] = predValue + (type_-exe_params->intvRadius)*interval; |
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197 | break; |
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198 | } |
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199 | //printf("%.30G\n",(*data)[i]); |
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200 | } |
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201 | |
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202 | #ifdef HAVE_TIMECMPR |
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203 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
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204 | memcpy(multisteps->hist_data, (*data), dataSeriesLength*sizeof(float)); |
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205 | #endif |
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206 | |
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207 | free(leadNum); |
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208 | free(type); |
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209 | return; |
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210 | } |
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211 | |
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212 | void decompressDataSeries_float_2D(float** data, size_t r1, size_t r2, TightDataPointStorageF* tdps) |
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213 | { |
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214 | updateQuantizationInfo(tdps->intervals); |
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215 | //printf("tdps->intervals=%d, exe_params->intvRadius=%d\n", tdps->intervals, exe_params->intvRadius); |
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216 | |
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217 | size_t j, k = 0, p = 0, l = 0; // k is to track the location of residual_bit |
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218 | // in resiMidBits, p is to track the |
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219 | // byte_index of resiMidBits, l is for |
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220 | // leadNum |
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221 | size_t dataSeriesLength = r1*r2; |
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222 | // printf ("%d %d\n", r1, r2); |
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223 | |
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224 | unsigned char* leadNum; |
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225 | double realPrecision = tdps->realPrecision; |
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226 | |
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227 | convertByteArray2IntArray_fast_2b(tdps->exactDataNum, tdps->leadNumArray, tdps->leadNumArray_size, &leadNum); |
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228 | |
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229 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
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230 | |
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231 | int* type = (int*)malloc(dataSeriesLength*sizeof(int)); |
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232 | |
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233 | HuffmanTree* huffmanTree = createHuffmanTree(tdps->stateNum); |
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234 | decode_withTree(huffmanTree, tdps->typeArray, dataSeriesLength, type); |
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235 | SZ_ReleaseHuffman(huffmanTree); |
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236 | |
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237 | unsigned char preBytes[4]; |
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238 | unsigned char curBytes[4]; |
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239 | |
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240 | memset(preBytes, 0, 4); |
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241 | |
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242 | size_t curByteIndex = 0; |
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243 | int reqBytesLength, resiBitsLength, resiBits; |
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244 | unsigned char leadingNum; |
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245 | float medianValue, exactData; |
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246 | int type_; |
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247 | |
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248 | reqBytesLength = tdps->reqLength/8; |
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249 | resiBitsLength = tdps->reqLength%8; |
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250 | medianValue = tdps->medianValue; |
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251 | |
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252 | float pred1D, pred2D; |
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253 | size_t ii, jj; |
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254 | |
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255 | /* Process Row-0, data 0 */ |
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256 | |
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257 | // compute resiBits |
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258 | resiBits = 0; |
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259 | if (resiBitsLength != 0) { |
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260 | int kMod8 = k % 8; |
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261 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
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262 | if (rightMovSteps > 0) { |
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263 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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264 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
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265 | } else if (rightMovSteps < 0) { |
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266 | int code1 = getLeftMovingCode(kMod8); |
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267 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
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268 | int leftMovSteps = -rightMovSteps; |
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269 | rightMovSteps = 8 - leftMovSteps; |
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270 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
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271 | p++; |
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272 | resiBits = resiBits |
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273 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
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274 | } else // rightMovSteps == 0 |
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275 | { |
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276 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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277 | resiBits = (tdps->residualMidBits[p] & code); |
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278 | p++; |
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279 | } |
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280 | k += resiBitsLength; |
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281 | } |
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282 | |
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283 | // recover the exact data |
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284 | memset(curBytes, 0, 4); |
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285 | leadingNum = leadNum[l++]; |
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286 | memcpy(curBytes, preBytes, leadingNum); |
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287 | for (j = leadingNum; j < reqBytesLength; j++) |
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288 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
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289 | if (resiBitsLength != 0) { |
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290 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
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291 | curBytes[reqBytesLength] = resiByte; |
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292 | } |
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293 | |
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294 | exactData = bytesToFloat(curBytes); |
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295 | (*data)[0] = exactData + medianValue; |
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296 | memcpy(preBytes,curBytes,4); |
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297 | |
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298 | /* Process Row-0, data 1 */ |
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299 | type_ = type[1]; |
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300 | if (type_ != 0) |
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301 | { |
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302 | pred1D = (*data)[0]; |
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303 | (*data)[1] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
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304 | } |
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305 | else |
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306 | { |
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307 | // compute resiBits |
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308 | resiBits = 0; |
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309 | if (resiBitsLength != 0) { |
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310 | int kMod8 = k % 8; |
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311 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
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312 | if (rightMovSteps > 0) { |
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313 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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314 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
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315 | } else if (rightMovSteps < 0) { |
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316 | int code1 = getLeftMovingCode(kMod8); |
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317 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
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318 | int leftMovSteps = -rightMovSteps; |
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319 | rightMovSteps = 8 - leftMovSteps; |
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320 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
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321 | p++; |
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322 | resiBits = resiBits |
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323 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
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324 | } else // rightMovSteps == 0 |
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325 | { |
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326 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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327 | resiBits = (tdps->residualMidBits[p] & code); |
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328 | p++; |
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329 | } |
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330 | k += resiBitsLength; |
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331 | } |
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332 | |
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333 | // recover the exact data |
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334 | memset(curBytes, 0, 4); |
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335 | leadingNum = leadNum[l++]; |
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336 | memcpy(curBytes, preBytes, leadingNum); |
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337 | for (j = leadingNum; j < reqBytesLength; j++) |
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338 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
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339 | if (resiBitsLength != 0) { |
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340 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
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341 | curBytes[reqBytesLength] = resiByte; |
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342 | } |
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343 | |
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344 | exactData = bytesToFloat(curBytes); |
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345 | (*data)[1] = exactData + medianValue; |
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346 | memcpy(preBytes,curBytes,4); |
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347 | } |
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348 | |
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349 | /* Process Row-0, data 2 --> data r2-1 */ |
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350 | for (jj = 2; jj < r2; jj++) |
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351 | { |
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352 | type_ = type[jj]; |
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353 | if (type_ != 0) |
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354 | { |
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355 | pred1D = 2*(*data)[jj-1] - (*data)[jj-2]; |
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356 | (*data)[jj] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
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357 | } |
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358 | else |
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359 | { |
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360 | // compute resiBits |
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361 | resiBits = 0; |
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362 | if (resiBitsLength != 0) { |
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363 | int kMod8 = k % 8; |
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364 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
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365 | if (rightMovSteps > 0) { |
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366 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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367 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
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368 | } else if (rightMovSteps < 0) { |
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369 | int code1 = getLeftMovingCode(kMod8); |
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370 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
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371 | int leftMovSteps = -rightMovSteps; |
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372 | rightMovSteps = 8 - leftMovSteps; |
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373 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
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374 | p++; |
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375 | resiBits = resiBits |
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376 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
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377 | } else // rightMovSteps == 0 |
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378 | { |
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379 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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380 | resiBits = (tdps->residualMidBits[p] & code); |
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381 | p++; |
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382 | } |
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383 | k += resiBitsLength; |
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384 | } |
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385 | |
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386 | // recover the exact data |
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387 | memset(curBytes, 0, 4); |
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388 | leadingNum = leadNum[l++]; |
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389 | memcpy(curBytes, preBytes, leadingNum); |
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390 | for (j = leadingNum; j < reqBytesLength; j++) |
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391 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
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392 | if (resiBitsLength != 0) { |
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393 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
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394 | curBytes[reqBytesLength] = resiByte; |
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395 | } |
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396 | |
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397 | exactData = bytesToFloat(curBytes); |
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398 | (*data)[jj] = exactData + medianValue; |
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399 | memcpy(preBytes,curBytes,4); |
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400 | } |
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401 | } |
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402 | |
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403 | size_t index; |
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404 | /* Process Row-1 --> Row-r1-1 */ |
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405 | for (ii = 1; ii < r1; ii++) |
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406 | { |
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407 | /* Process row-ii data 0 */ |
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408 | index = ii*r2; |
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409 | |
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410 | type_ = type[index]; |
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411 | if (type_ != 0) |
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412 | { |
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413 | pred1D = (*data)[index-r2]; |
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414 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
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415 | } |
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416 | else |
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417 | { |
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418 | // compute resiBits |
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419 | resiBits = 0; |
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420 | if (resiBitsLength != 0) { |
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421 | int kMod8 = k % 8; |
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422 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
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423 | if (rightMovSteps > 0) { |
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424 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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425 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
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426 | } else if (rightMovSteps < 0) { |
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427 | int code1 = getLeftMovingCode(kMod8); |
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428 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
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429 | int leftMovSteps = -rightMovSteps; |
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430 | rightMovSteps = 8 - leftMovSteps; |
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431 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
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432 | p++; |
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433 | resiBits = resiBits |
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434 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
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435 | } else // rightMovSteps == 0 |
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436 | { |
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437 | int code = getRightMovingCode(kMod8, resiBitsLength); |
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438 | resiBits = (tdps->residualMidBits[p] & code); |
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439 | p++; |
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440 | } |
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441 | k += resiBitsLength; |
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442 | } |
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443 | |
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444 | // recover the exact data |
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445 | memset(curBytes, 0, 4); |
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446 | leadingNum = leadNum[l++]; |
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447 | memcpy(curBytes, preBytes, leadingNum); |
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448 | for (j = leadingNum; j < reqBytesLength; j++) |
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449 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
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450 | if (resiBitsLength != 0) { |
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451 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
452 | curBytes[reqBytesLength] = resiByte; |
---|
453 | } |
---|
454 | |
---|
455 | exactData = bytesToFloat(curBytes); |
---|
456 | (*data)[index] = exactData + medianValue; |
---|
457 | memcpy(preBytes,curBytes,4); |
---|
458 | } |
---|
459 | |
---|
460 | /* Process row-ii data 1 --> r2-1*/ |
---|
461 | for (jj = 1; jj < r2; jj++) |
---|
462 | { |
---|
463 | index = ii*r2+jj; |
---|
464 | pred2D = (*data)[index-1] + (*data)[index-r2] - (*data)[index-r2-1]; |
---|
465 | |
---|
466 | type_ = type[index]; |
---|
467 | if (type_ != 0) |
---|
468 | { |
---|
469 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
470 | } |
---|
471 | else |
---|
472 | { |
---|
473 | // compute resiBits |
---|
474 | resiBits = 0; |
---|
475 | if (resiBitsLength != 0) { |
---|
476 | int kMod8 = k % 8; |
---|
477 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
478 | if (rightMovSteps > 0) { |
---|
479 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
480 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
481 | } else if (rightMovSteps < 0) { |
---|
482 | int code1 = getLeftMovingCode(kMod8); |
---|
483 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
484 | int leftMovSteps = -rightMovSteps; |
---|
485 | rightMovSteps = 8 - leftMovSteps; |
---|
486 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
487 | p++; |
---|
488 | resiBits = resiBits |
---|
489 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
490 | } else // rightMovSteps == 0 |
---|
491 | { |
---|
492 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
493 | resiBits = (tdps->residualMidBits[p] & code); |
---|
494 | p++; |
---|
495 | } |
---|
496 | k += resiBitsLength; |
---|
497 | } |
---|
498 | |
---|
499 | // recover the exact data |
---|
500 | memset(curBytes, 0, 4); |
---|
501 | leadingNum = leadNum[l++]; |
---|
502 | memcpy(curBytes, preBytes, leadingNum); |
---|
503 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
504 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
505 | if (resiBitsLength != 0) { |
---|
506 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
507 | curBytes[reqBytesLength] = resiByte; |
---|
508 | } |
---|
509 | |
---|
510 | exactData = bytesToFloat(curBytes); |
---|
511 | (*data)[index] = exactData + medianValue; |
---|
512 | memcpy(preBytes,curBytes,4); |
---|
513 | } |
---|
514 | } |
---|
515 | } |
---|
516 | |
---|
517 | #ifdef HAVE_TIMECMPR |
---|
518 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
519 | memcpy(multisteps->hist_data, (*data), dataSeriesLength*sizeof(float)); |
---|
520 | #endif |
---|
521 | |
---|
522 | free(leadNum); |
---|
523 | free(type); |
---|
524 | return; |
---|
525 | } |
---|
526 | |
---|
527 | void decompressDataSeries_float_3D(float** data, size_t r1, size_t r2, size_t r3, TightDataPointStorageF* tdps) |
---|
528 | { |
---|
529 | updateQuantizationInfo(tdps->intervals); |
---|
530 | size_t j, k = 0, p = 0, l = 0; // k is to track the location of residual_bit |
---|
531 | // in resiMidBits, p is to track the |
---|
532 | // byte_index of resiMidBits, l is for |
---|
533 | // leadNum |
---|
534 | size_t dataSeriesLength = r1*r2*r3; |
---|
535 | size_t r23 = r2*r3; |
---|
536 | unsigned char* leadNum; |
---|
537 | double realPrecision = tdps->realPrecision; |
---|
538 | |
---|
539 | //TODO |
---|
540 | convertByteArray2IntArray_fast_2b(tdps->exactDataNum, tdps->leadNumArray, tdps->leadNumArray_size, &leadNum); |
---|
541 | |
---|
542 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
543 | int* type = (int*)malloc(dataSeriesLength*sizeof(int)); |
---|
544 | |
---|
545 | HuffmanTree* huffmanTree = createHuffmanTree(tdps->stateNum); |
---|
546 | decode_withTree(huffmanTree, tdps->typeArray, dataSeriesLength, type); |
---|
547 | SZ_ReleaseHuffman(huffmanTree); |
---|
548 | |
---|
549 | unsigned char preBytes[4]; |
---|
550 | unsigned char curBytes[4]; |
---|
551 | |
---|
552 | memset(preBytes, 0, 4); |
---|
553 | size_t curByteIndex = 0; |
---|
554 | int reqBytesLength, resiBitsLength, resiBits; |
---|
555 | unsigned char leadingNum; |
---|
556 | float medianValue, exactData; |
---|
557 | int type_; |
---|
558 | |
---|
559 | reqBytesLength = tdps->reqLength/8; |
---|
560 | resiBitsLength = tdps->reqLength%8; |
---|
561 | medianValue = tdps->medianValue; |
---|
562 | |
---|
563 | float pred1D, pred2D, pred3D; |
---|
564 | size_t ii, jj, kk; |
---|
565 | |
---|
566 | /////////////////////////// Process layer-0 /////////////////////////// |
---|
567 | /* Process Row-0 data 0*/ |
---|
568 | // compute resiBits |
---|
569 | resiBits = 0; |
---|
570 | if (resiBitsLength != 0) { |
---|
571 | int kMod8 = k % 8; |
---|
572 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
573 | if (rightMovSteps > 0) { |
---|
574 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
575 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
576 | } else if (rightMovSteps < 0) { |
---|
577 | int code1 = getLeftMovingCode(kMod8); |
---|
578 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
579 | int leftMovSteps = -rightMovSteps; |
---|
580 | rightMovSteps = 8 - leftMovSteps; |
---|
581 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
582 | p++; |
---|
583 | resiBits = resiBits |
---|
584 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
585 | } else // rightMovSteps == 0 |
---|
586 | { |
---|
587 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
588 | resiBits = (tdps->residualMidBits[p] & code); |
---|
589 | p++; |
---|
590 | } |
---|
591 | k += resiBitsLength; |
---|
592 | } |
---|
593 | |
---|
594 | // recover the exact data |
---|
595 | memset(curBytes, 0, 4); |
---|
596 | leadingNum = leadNum[l++]; |
---|
597 | memcpy(curBytes, preBytes, leadingNum); |
---|
598 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
599 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
600 | if (resiBitsLength != 0) { |
---|
601 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
602 | curBytes[reqBytesLength] = resiByte; |
---|
603 | } |
---|
604 | exactData = bytesToFloat(curBytes); |
---|
605 | (*data)[0] = exactData + medianValue; |
---|
606 | memcpy(preBytes,curBytes,4); |
---|
607 | |
---|
608 | /* Process Row-0, data 1 */ |
---|
609 | pred1D = (*data)[0]; |
---|
610 | |
---|
611 | type_ = type[1]; |
---|
612 | if (type_ != 0) |
---|
613 | { |
---|
614 | (*data)[1] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
615 | } |
---|
616 | else |
---|
617 | { |
---|
618 | // compute resiBits |
---|
619 | resiBits = 0; |
---|
620 | if (resiBitsLength != 0) { |
---|
621 | int kMod8 = k % 8; |
---|
622 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
623 | if (rightMovSteps > 0) { |
---|
624 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
625 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
626 | } else if (rightMovSteps < 0) { |
---|
627 | int code1 = getLeftMovingCode(kMod8); |
---|
628 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
629 | int leftMovSteps = -rightMovSteps; |
---|
630 | rightMovSteps = 8 - leftMovSteps; |
---|
631 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
632 | p++; |
---|
633 | resiBits = resiBits |
---|
634 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
635 | } else // rightMovSteps == 0 |
---|
636 | { |
---|
637 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
638 | resiBits = (tdps->residualMidBits[p] & code); |
---|
639 | p++; |
---|
640 | } |
---|
641 | k += resiBitsLength; |
---|
642 | } |
---|
643 | |
---|
644 | // recover the exact data |
---|
645 | memset(curBytes, 0, 4); |
---|
646 | leadingNum = leadNum[l++]; |
---|
647 | memcpy(curBytes, preBytes, leadingNum); |
---|
648 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
649 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
650 | if (resiBitsLength != 0) { |
---|
651 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
652 | curBytes[reqBytesLength] = resiByte; |
---|
653 | } |
---|
654 | |
---|
655 | exactData = bytesToFloat(curBytes); |
---|
656 | (*data)[1] = exactData + medianValue; |
---|
657 | memcpy(preBytes,curBytes,4); |
---|
658 | } |
---|
659 | /* Process Row-0, data 2 --> data r3-1 */ |
---|
660 | for (jj = 2; jj < r3; jj++) |
---|
661 | { |
---|
662 | pred1D = 2*(*data)[jj-1] - (*data)[jj-2]; |
---|
663 | |
---|
664 | type_ = type[jj]; |
---|
665 | if (type_ != 0) |
---|
666 | { |
---|
667 | (*data)[jj] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
668 | } |
---|
669 | else |
---|
670 | { |
---|
671 | // compute resiBits |
---|
672 | resiBits = 0; |
---|
673 | if (resiBitsLength != 0) { |
---|
674 | int kMod8 = k % 8; |
---|
675 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
676 | if (rightMovSteps > 0) { |
---|
677 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
678 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
679 | } else if (rightMovSteps < 0) { |
---|
680 | int code1 = getLeftMovingCode(kMod8); |
---|
681 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
682 | int leftMovSteps = -rightMovSteps; |
---|
683 | rightMovSteps = 8 - leftMovSteps; |
---|
684 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
685 | p++; |
---|
686 | resiBits = resiBits |
---|
687 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
688 | } else // rightMovSteps == 0 |
---|
689 | { |
---|
690 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
691 | resiBits = (tdps->residualMidBits[p] & code); |
---|
692 | p++; |
---|
693 | } |
---|
694 | k += resiBitsLength; |
---|
695 | } |
---|
696 | |
---|
697 | // recover the exact data |
---|
698 | memset(curBytes, 0, 4); |
---|
699 | leadingNum = leadNum[l++]; |
---|
700 | memcpy(curBytes, preBytes, leadingNum); |
---|
701 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
702 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
703 | if (resiBitsLength != 0) { |
---|
704 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
705 | curBytes[reqBytesLength] = resiByte; |
---|
706 | } |
---|
707 | |
---|
708 | exactData = bytesToFloat(curBytes); |
---|
709 | (*data)[jj] = exactData + medianValue; |
---|
710 | memcpy(preBytes,curBytes,4); |
---|
711 | } |
---|
712 | } |
---|
713 | |
---|
714 | size_t index; |
---|
715 | /* Process Row-1 --> Row-r2-1 */ |
---|
716 | for (ii = 1; ii < r2; ii++) |
---|
717 | { |
---|
718 | /* Process row-ii data 0 */ |
---|
719 | index = ii*r3; |
---|
720 | pred1D = (*data)[index-r3]; |
---|
721 | |
---|
722 | type_ = type[index]; |
---|
723 | if (type_ != 0) |
---|
724 | { |
---|
725 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
726 | } |
---|
727 | else |
---|
728 | { |
---|
729 | // compute resiBits |
---|
730 | resiBits = 0; |
---|
731 | if (resiBitsLength != 0) { |
---|
732 | int kMod8 = k % 8; |
---|
733 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
734 | if (rightMovSteps > 0) { |
---|
735 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
736 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
737 | } else if (rightMovSteps < 0) { |
---|
738 | int code1 = getLeftMovingCode(kMod8); |
---|
739 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
740 | int leftMovSteps = -rightMovSteps; |
---|
741 | rightMovSteps = 8 - leftMovSteps; |
---|
742 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
743 | p++; |
---|
744 | resiBits = resiBits |
---|
745 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
746 | } else // rightMovSteps == 0 |
---|
747 | { |
---|
748 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
749 | resiBits = (tdps->residualMidBits[p] & code); |
---|
750 | p++; |
---|
751 | } |
---|
752 | k += resiBitsLength; |
---|
753 | } |
---|
754 | |
---|
755 | // recover the exact data |
---|
756 | memset(curBytes, 0, 4); |
---|
757 | leadingNum = leadNum[l++]; |
---|
758 | memcpy(curBytes, preBytes, leadingNum); |
---|
759 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
760 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
761 | if (resiBitsLength != 0) { |
---|
762 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
763 | curBytes[reqBytesLength] = resiByte; |
---|
764 | } |
---|
765 | |
---|
766 | exactData = bytesToFloat(curBytes); |
---|
767 | (*data)[index] = exactData + medianValue; |
---|
768 | memcpy(preBytes,curBytes,4); |
---|
769 | } |
---|
770 | |
---|
771 | /* Process row-ii data 1 --> r3-1*/ |
---|
772 | for (jj = 1; jj < r3; jj++) |
---|
773 | { |
---|
774 | index = ii*r3+jj; |
---|
775 | pred2D = (*data)[index-1] + (*data)[index-r3] - (*data)[index-r3-1]; |
---|
776 | |
---|
777 | type_ = type[index]; |
---|
778 | if (type_ != 0) |
---|
779 | { |
---|
780 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
781 | } |
---|
782 | else |
---|
783 | { |
---|
784 | // compute resiBits |
---|
785 | resiBits = 0; |
---|
786 | if (resiBitsLength != 0) { |
---|
787 | int kMod8 = k % 8; |
---|
788 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
789 | if (rightMovSteps > 0) { |
---|
790 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
791 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
792 | } else if (rightMovSteps < 0) { |
---|
793 | int code1 = getLeftMovingCode(kMod8); |
---|
794 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
795 | int leftMovSteps = -rightMovSteps; |
---|
796 | rightMovSteps = 8 - leftMovSteps; |
---|
797 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
798 | p++; |
---|
799 | resiBits = resiBits |
---|
800 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
801 | } else // rightMovSteps == 0 |
---|
802 | { |
---|
803 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
804 | resiBits = (tdps->residualMidBits[p] & code); |
---|
805 | p++; |
---|
806 | } |
---|
807 | k += resiBitsLength; |
---|
808 | } |
---|
809 | |
---|
810 | // recover the exact data |
---|
811 | memset(curBytes, 0, 4); |
---|
812 | leadingNum = leadNum[l++]; |
---|
813 | memcpy(curBytes, preBytes, leadingNum); |
---|
814 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
815 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
816 | if (resiBitsLength != 0) { |
---|
817 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
818 | curBytes[reqBytesLength] = resiByte; |
---|
819 | } |
---|
820 | |
---|
821 | exactData = bytesToFloat(curBytes); |
---|
822 | (*data)[index] = exactData + medianValue; |
---|
823 | memcpy(preBytes,curBytes,4); |
---|
824 | } |
---|
825 | } |
---|
826 | } |
---|
827 | |
---|
828 | /////////////////////////// Process layer-1 --> layer-r1-1 /////////////////////////// |
---|
829 | |
---|
830 | for (kk = 1; kk < r1; kk++) |
---|
831 | { |
---|
832 | /* Process Row-0 data 0*/ |
---|
833 | index = kk*r23; |
---|
834 | pred1D = (*data)[index-r23]; |
---|
835 | |
---|
836 | type_ = type[index]; |
---|
837 | if (type_ != 0) |
---|
838 | { |
---|
839 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
840 | } |
---|
841 | else |
---|
842 | { |
---|
843 | // compute resiBits |
---|
844 | resiBits = 0; |
---|
845 | if (resiBitsLength != 0) { |
---|
846 | int kMod8 = k % 8; |
---|
847 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
848 | if (rightMovSteps > 0) { |
---|
849 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
850 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
851 | } else if (rightMovSteps < 0) { |
---|
852 | int code1 = getLeftMovingCode(kMod8); |
---|
853 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
854 | int leftMovSteps = -rightMovSteps; |
---|
855 | rightMovSteps = 8 - leftMovSteps; |
---|
856 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
857 | p++; |
---|
858 | resiBits = resiBits |
---|
859 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
860 | } else // rightMovSteps == 0 |
---|
861 | { |
---|
862 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
863 | resiBits = (tdps->residualMidBits[p] & code); |
---|
864 | p++; |
---|
865 | } |
---|
866 | k += resiBitsLength; |
---|
867 | } |
---|
868 | |
---|
869 | // recover the exact data |
---|
870 | memset(curBytes, 0, 4); |
---|
871 | leadingNum = leadNum[l++]; |
---|
872 | memcpy(curBytes, preBytes, leadingNum); |
---|
873 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
874 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
875 | if (resiBitsLength != 0) { |
---|
876 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
877 | curBytes[reqBytesLength] = resiByte; |
---|
878 | } |
---|
879 | |
---|
880 | exactData = bytesToFloat(curBytes); |
---|
881 | (*data)[index] = exactData + medianValue; |
---|
882 | memcpy(preBytes,curBytes,4); |
---|
883 | } |
---|
884 | |
---|
885 | /* Process Row-0 data 1 --> data r3-1 */ |
---|
886 | for (jj = 1; jj < r3; jj++) |
---|
887 | { |
---|
888 | index = kk*r23+jj; |
---|
889 | pred2D = (*data)[index-1] + (*data)[index-r23] - (*data)[index-r23-1]; |
---|
890 | |
---|
891 | type_ = type[index]; |
---|
892 | if (type_ != 0) |
---|
893 | { |
---|
894 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
895 | } |
---|
896 | else |
---|
897 | { |
---|
898 | // compute resiBits |
---|
899 | resiBits = 0; |
---|
900 | if (resiBitsLength != 0) { |
---|
901 | int kMod8 = k % 8; |
---|
902 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
903 | if (rightMovSteps > 0) { |
---|
904 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
905 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
906 | } else if (rightMovSteps < 0) { |
---|
907 | int code1 = getLeftMovingCode(kMod8); |
---|
908 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
909 | int leftMovSteps = -rightMovSteps; |
---|
910 | rightMovSteps = 8 - leftMovSteps; |
---|
911 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
912 | p++; |
---|
913 | resiBits = resiBits |
---|
914 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
915 | } else // rightMovSteps == 0 |
---|
916 | { |
---|
917 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
918 | resiBits = (tdps->residualMidBits[p] & code); |
---|
919 | p++; |
---|
920 | } |
---|
921 | k += resiBitsLength; |
---|
922 | } |
---|
923 | |
---|
924 | // recover the exact data |
---|
925 | memset(curBytes, 0, 4); |
---|
926 | leadingNum = leadNum[l++]; |
---|
927 | memcpy(curBytes, preBytes, leadingNum); |
---|
928 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
929 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
930 | if (resiBitsLength != 0) { |
---|
931 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
932 | curBytes[reqBytesLength] = resiByte; |
---|
933 | } |
---|
934 | |
---|
935 | exactData = bytesToFloat(curBytes); |
---|
936 | (*data)[index] = exactData + medianValue; |
---|
937 | memcpy(preBytes,curBytes,4); |
---|
938 | } |
---|
939 | } |
---|
940 | |
---|
941 | /* Process Row-1 --> Row-r2-1 */ |
---|
942 | for (ii = 1; ii < r2; ii++) |
---|
943 | { |
---|
944 | /* Process Row-i data 0 */ |
---|
945 | index = kk*r23 + ii*r3; |
---|
946 | pred2D = (*data)[index-r3] + (*data)[index-r23] - (*data)[index-r23-r3]; |
---|
947 | |
---|
948 | type_ = type[index]; |
---|
949 | if (type_ != 0) |
---|
950 | { |
---|
951 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
952 | } |
---|
953 | else |
---|
954 | { |
---|
955 | // compute resiBits |
---|
956 | resiBits = 0; |
---|
957 | if (resiBitsLength != 0) { |
---|
958 | int kMod8 = k % 8; |
---|
959 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
960 | if (rightMovSteps > 0) { |
---|
961 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
962 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
963 | } else if (rightMovSteps < 0) { |
---|
964 | int code1 = getLeftMovingCode(kMod8); |
---|
965 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
966 | int leftMovSteps = -rightMovSteps; |
---|
967 | rightMovSteps = 8 - leftMovSteps; |
---|
968 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
969 | p++; |
---|
970 | resiBits = resiBits |
---|
971 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
972 | } else // rightMovSteps == 0 |
---|
973 | { |
---|
974 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
975 | resiBits = (tdps->residualMidBits[p] & code); |
---|
976 | p++; |
---|
977 | } |
---|
978 | k += resiBitsLength; |
---|
979 | } |
---|
980 | |
---|
981 | // recover the exact data |
---|
982 | memset(curBytes, 0, 4); |
---|
983 | leadingNum = leadNum[l++]; |
---|
984 | memcpy(curBytes, preBytes, leadingNum); |
---|
985 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
986 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
987 | if (resiBitsLength != 0) { |
---|
988 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
989 | curBytes[reqBytesLength] = resiByte; |
---|
990 | } |
---|
991 | |
---|
992 | exactData = bytesToFloat(curBytes); |
---|
993 | (*data)[index] = exactData + medianValue; |
---|
994 | memcpy(preBytes,curBytes,4); |
---|
995 | } |
---|
996 | |
---|
997 | /* Process Row-i data 1 --> data r3-1 */ |
---|
998 | for (jj = 1; jj < r3; jj++) |
---|
999 | { |
---|
1000 | index = kk*r23 + ii*r3 + jj; |
---|
1001 | pred3D = (*data)[index-1] + (*data)[index-r3] + (*data)[index-r23] |
---|
1002 | - (*data)[index-r3-1] - (*data)[index-r23-r3] - (*data)[index-r23-1] + (*data)[index-r23-r3-1]; |
---|
1003 | |
---|
1004 | type_ = type[index]; |
---|
1005 | if (type_ != 0) |
---|
1006 | { |
---|
1007 | (*data)[index] = pred3D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1008 | } |
---|
1009 | else |
---|
1010 | { |
---|
1011 | // compute resiBits |
---|
1012 | resiBits = 0; |
---|
1013 | if (resiBitsLength != 0) { |
---|
1014 | int kMod8 = k % 8; |
---|
1015 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1016 | if (rightMovSteps > 0) { |
---|
1017 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1018 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1019 | } else if (rightMovSteps < 0) { |
---|
1020 | int code1 = getLeftMovingCode(kMod8); |
---|
1021 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1022 | int leftMovSteps = -rightMovSteps; |
---|
1023 | rightMovSteps = 8 - leftMovSteps; |
---|
1024 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1025 | p++; |
---|
1026 | resiBits = resiBits |
---|
1027 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1028 | } else // rightMovSteps == 0 |
---|
1029 | { |
---|
1030 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1031 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1032 | p++; |
---|
1033 | } |
---|
1034 | k += resiBitsLength; |
---|
1035 | } |
---|
1036 | |
---|
1037 | // recover the exact data |
---|
1038 | memset(curBytes, 0, 4); |
---|
1039 | leadingNum = leadNum[l++]; |
---|
1040 | memcpy(curBytes, preBytes, leadingNum); |
---|
1041 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1042 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1043 | if (resiBitsLength != 0) { |
---|
1044 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1045 | curBytes[reqBytesLength] = resiByte; |
---|
1046 | } |
---|
1047 | |
---|
1048 | exactData = bytesToFloat(curBytes); |
---|
1049 | (*data)[index] = exactData + medianValue; |
---|
1050 | memcpy(preBytes,curBytes,4); |
---|
1051 | } |
---|
1052 | } |
---|
1053 | } |
---|
1054 | } |
---|
1055 | |
---|
1056 | #ifdef HAVE_TIMECMPR |
---|
1057 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1058 | memcpy(multisteps->hist_data, (*data), dataSeriesLength*sizeof(float)); |
---|
1059 | #endif |
---|
1060 | |
---|
1061 | free(leadNum); |
---|
1062 | free(type); |
---|
1063 | return; |
---|
1064 | } |
---|
1065 | |
---|
1066 | |
---|
1067 | void decompressDataSeries_float_4D(float** data, size_t r1, size_t r2, size_t r3, size_t r4, TightDataPointStorageF* tdps) |
---|
1068 | { |
---|
1069 | updateQuantizationInfo(tdps->intervals); |
---|
1070 | size_t j, k = 0, p = 0, l = 0; // k is to track the location of residual_bit |
---|
1071 | // in resiMidBits, p is to track the |
---|
1072 | // byte_index of resiMidBits, l is for |
---|
1073 | // leadNum |
---|
1074 | size_t dataSeriesLength = r1*r2*r3*r4; |
---|
1075 | size_t r234 = r2*r3*r4; |
---|
1076 | size_t r34 = r3*r4; |
---|
1077 | // printf ("%d %d %d %d\n", r1, r2, r3, r4); |
---|
1078 | unsigned char* leadNum; |
---|
1079 | double realPrecision = tdps->realPrecision; |
---|
1080 | |
---|
1081 | convertByteArray2IntArray_fast_2b(tdps->exactDataNum, tdps->leadNumArray, tdps->leadNumArray_size, &leadNum); |
---|
1082 | |
---|
1083 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1084 | int* type = (int*)malloc(dataSeriesLength*sizeof(int)); |
---|
1085 | |
---|
1086 | HuffmanTree* huffmanTree = createHuffmanTree(tdps->stateNum); |
---|
1087 | decode_withTree(huffmanTree, tdps->typeArray, dataSeriesLength, type); |
---|
1088 | SZ_ReleaseHuffman(huffmanTree); |
---|
1089 | |
---|
1090 | unsigned char preBytes[4]; |
---|
1091 | unsigned char curBytes[4]; |
---|
1092 | |
---|
1093 | memset(preBytes, 0, 4); |
---|
1094 | size_t curByteIndex = 0; |
---|
1095 | int reqBytesLength, resiBitsLength, resiBits; |
---|
1096 | unsigned char leadingNum; |
---|
1097 | float medianValue, exactData; |
---|
1098 | int type_; |
---|
1099 | |
---|
1100 | reqBytesLength = tdps->reqLength/8; |
---|
1101 | resiBitsLength = tdps->reqLength%8; |
---|
1102 | medianValue = tdps->medianValue; |
---|
1103 | |
---|
1104 | float pred1D, pred2D, pred3D; |
---|
1105 | size_t ii, jj, kk, ll; |
---|
1106 | size_t index; |
---|
1107 | |
---|
1108 | for (ll = 0; ll < r1; ll++) |
---|
1109 | { |
---|
1110 | |
---|
1111 | /////////////////////////// Process layer-0 /////////////////////////// |
---|
1112 | /* Process Row-0 data 0*/ |
---|
1113 | index = ll*r234; |
---|
1114 | |
---|
1115 | // compute resiBits |
---|
1116 | resiBits = 0; |
---|
1117 | if (resiBitsLength != 0) { |
---|
1118 | int kMod8 = k % 8; |
---|
1119 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1120 | if (rightMovSteps > 0) { |
---|
1121 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1122 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1123 | } else if (rightMovSteps < 0) { |
---|
1124 | int code1 = getLeftMovingCode(kMod8); |
---|
1125 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1126 | int leftMovSteps = -rightMovSteps; |
---|
1127 | rightMovSteps = 8 - leftMovSteps; |
---|
1128 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1129 | p++; |
---|
1130 | resiBits = resiBits |
---|
1131 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1132 | } else // rightMovSteps == 0 |
---|
1133 | { |
---|
1134 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1135 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1136 | p++; |
---|
1137 | } |
---|
1138 | k += resiBitsLength; |
---|
1139 | } |
---|
1140 | |
---|
1141 | // recover the exact data |
---|
1142 | memset(curBytes, 0, 4); |
---|
1143 | leadingNum = leadNum[l++]; |
---|
1144 | memcpy(curBytes, preBytes, leadingNum); |
---|
1145 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1146 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1147 | if (resiBitsLength != 0) { |
---|
1148 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1149 | curBytes[reqBytesLength] = resiByte; |
---|
1150 | } |
---|
1151 | exactData = bytesToFloat(curBytes); |
---|
1152 | (*data)[index] = exactData + medianValue; |
---|
1153 | memcpy(preBytes,curBytes,4); |
---|
1154 | |
---|
1155 | /* Process Row-0, data 1 */ |
---|
1156 | index = ll*r234+1; |
---|
1157 | |
---|
1158 | pred1D = (*data)[index-1]; |
---|
1159 | |
---|
1160 | type_ = type[index]; |
---|
1161 | if (type_ != 0) |
---|
1162 | { |
---|
1163 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1164 | } |
---|
1165 | else |
---|
1166 | { |
---|
1167 | // compute resiBits |
---|
1168 | resiBits = 0; |
---|
1169 | if (resiBitsLength != 0) { |
---|
1170 | int kMod8 = k % 8; |
---|
1171 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1172 | if (rightMovSteps > 0) { |
---|
1173 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1174 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1175 | } else if (rightMovSteps < 0) { |
---|
1176 | int code1 = getLeftMovingCode(kMod8); |
---|
1177 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1178 | int leftMovSteps = -rightMovSteps; |
---|
1179 | rightMovSteps = 8 - leftMovSteps; |
---|
1180 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1181 | p++; |
---|
1182 | resiBits = resiBits |
---|
1183 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1184 | } else // rightMovSteps == 0 |
---|
1185 | { |
---|
1186 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1187 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1188 | p++; |
---|
1189 | } |
---|
1190 | k += resiBitsLength; |
---|
1191 | } |
---|
1192 | |
---|
1193 | // recover the exact data |
---|
1194 | memset(curBytes, 0, 4); |
---|
1195 | leadingNum = leadNum[l++]; |
---|
1196 | memcpy(curBytes, preBytes, leadingNum); |
---|
1197 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1198 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1199 | if (resiBitsLength != 0) { |
---|
1200 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1201 | curBytes[reqBytesLength] = resiByte; |
---|
1202 | } |
---|
1203 | |
---|
1204 | exactData = bytesToFloat(curBytes); |
---|
1205 | (*data)[index] = exactData + medianValue; |
---|
1206 | memcpy(preBytes,curBytes,4); |
---|
1207 | } |
---|
1208 | |
---|
1209 | /* Process Row-0, data 2 --> data r4-1 */ |
---|
1210 | for (jj = 2; jj < r4; jj++) |
---|
1211 | { |
---|
1212 | index = ll*r234+jj; |
---|
1213 | |
---|
1214 | pred1D = 2*(*data)[index-1] - (*data)[index-2]; |
---|
1215 | |
---|
1216 | type_ = type[index]; |
---|
1217 | if (type_ != 0) |
---|
1218 | { |
---|
1219 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1220 | } |
---|
1221 | else |
---|
1222 | { |
---|
1223 | // compute resiBits |
---|
1224 | resiBits = 0; |
---|
1225 | if (resiBitsLength != 0) { |
---|
1226 | int kMod8 = k % 8; |
---|
1227 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1228 | if (rightMovSteps > 0) { |
---|
1229 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1230 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1231 | } else if (rightMovSteps < 0) { |
---|
1232 | int code1 = getLeftMovingCode(kMod8); |
---|
1233 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1234 | int leftMovSteps = -rightMovSteps; |
---|
1235 | rightMovSteps = 8 - leftMovSteps; |
---|
1236 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1237 | p++; |
---|
1238 | resiBits = resiBits |
---|
1239 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1240 | } else // rightMovSteps == 0 |
---|
1241 | { |
---|
1242 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1243 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1244 | p++; |
---|
1245 | } |
---|
1246 | k += resiBitsLength; |
---|
1247 | } |
---|
1248 | |
---|
1249 | // recover the exact data |
---|
1250 | memset(curBytes, 0, 4); |
---|
1251 | leadingNum = leadNum[l++]; |
---|
1252 | memcpy(curBytes, preBytes, leadingNum); |
---|
1253 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1254 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1255 | if (resiBitsLength != 0) { |
---|
1256 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1257 | curBytes[reqBytesLength] = resiByte; |
---|
1258 | } |
---|
1259 | |
---|
1260 | exactData = bytesToFloat(curBytes); |
---|
1261 | (*data)[index] = exactData + medianValue; |
---|
1262 | memcpy(preBytes,curBytes,4); |
---|
1263 | } |
---|
1264 | } |
---|
1265 | |
---|
1266 | /* Process Row-1 --> Row-r3-1 */ |
---|
1267 | for (ii = 1; ii < r3; ii++) |
---|
1268 | { |
---|
1269 | /* Process row-ii data 0 */ |
---|
1270 | index = ll*r234+ii*r4; |
---|
1271 | |
---|
1272 | pred1D = (*data)[index-r4]; |
---|
1273 | |
---|
1274 | type_ = type[index]; |
---|
1275 | if (type_ != 0) |
---|
1276 | { |
---|
1277 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1278 | } |
---|
1279 | else |
---|
1280 | { |
---|
1281 | // compute resiBits |
---|
1282 | resiBits = 0; |
---|
1283 | if (resiBitsLength != 0) { |
---|
1284 | int kMod8 = k % 8; |
---|
1285 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1286 | if (rightMovSteps > 0) { |
---|
1287 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1288 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1289 | } else if (rightMovSteps < 0) { |
---|
1290 | int code1 = getLeftMovingCode(kMod8); |
---|
1291 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1292 | int leftMovSteps = -rightMovSteps; |
---|
1293 | rightMovSteps = 8 - leftMovSteps; |
---|
1294 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1295 | p++; |
---|
1296 | resiBits = resiBits |
---|
1297 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1298 | } else // rightMovSteps == 0 |
---|
1299 | { |
---|
1300 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1301 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1302 | p++; |
---|
1303 | } |
---|
1304 | k += resiBitsLength; |
---|
1305 | } |
---|
1306 | |
---|
1307 | // recover the exact data |
---|
1308 | memset(curBytes, 0, 4); |
---|
1309 | leadingNum = leadNum[l++]; |
---|
1310 | memcpy(curBytes, preBytes, leadingNum); |
---|
1311 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1312 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1313 | if (resiBitsLength != 0) { |
---|
1314 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1315 | curBytes[reqBytesLength] = resiByte; |
---|
1316 | } |
---|
1317 | |
---|
1318 | exactData = bytesToFloat(curBytes); |
---|
1319 | (*data)[index] = exactData + medianValue; |
---|
1320 | memcpy(preBytes,curBytes,4); |
---|
1321 | } |
---|
1322 | |
---|
1323 | /* Process row-ii data 1 --> r4-1*/ |
---|
1324 | for (jj = 1; jj < r4; jj++) |
---|
1325 | { |
---|
1326 | index = ll*r234+ii*r4+jj; |
---|
1327 | |
---|
1328 | pred2D = (*data)[index-1] + (*data)[index-r4] - (*data)[index-r4-1]; |
---|
1329 | |
---|
1330 | type_ = type[index]; |
---|
1331 | if (type_ != 0) |
---|
1332 | { |
---|
1333 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1334 | } |
---|
1335 | else |
---|
1336 | { |
---|
1337 | // compute resiBits |
---|
1338 | resiBits = 0; |
---|
1339 | if (resiBitsLength != 0) { |
---|
1340 | int kMod8 = k % 8; |
---|
1341 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1342 | if (rightMovSteps > 0) { |
---|
1343 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1344 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1345 | } else if (rightMovSteps < 0) { |
---|
1346 | int code1 = getLeftMovingCode(kMod8); |
---|
1347 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1348 | int leftMovSteps = -rightMovSteps; |
---|
1349 | rightMovSteps = 8 - leftMovSteps; |
---|
1350 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1351 | p++; |
---|
1352 | resiBits = resiBits |
---|
1353 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1354 | } else // rightMovSteps == 0 |
---|
1355 | { |
---|
1356 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1357 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1358 | p++; |
---|
1359 | } |
---|
1360 | k += resiBitsLength; |
---|
1361 | } |
---|
1362 | |
---|
1363 | // recover the exact data |
---|
1364 | memset(curBytes, 0, 4); |
---|
1365 | leadingNum = leadNum[l++]; |
---|
1366 | memcpy(curBytes, preBytes, leadingNum); |
---|
1367 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1368 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1369 | if (resiBitsLength != 0) { |
---|
1370 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1371 | curBytes[reqBytesLength] = resiByte; |
---|
1372 | } |
---|
1373 | |
---|
1374 | exactData = bytesToFloat(curBytes); |
---|
1375 | (*data)[index] = exactData + medianValue; |
---|
1376 | memcpy(preBytes,curBytes,4); |
---|
1377 | } |
---|
1378 | } |
---|
1379 | } |
---|
1380 | |
---|
1381 | /////////////////////////// Process layer-1 --> layer-r2-1 /////////////////////////// |
---|
1382 | |
---|
1383 | for (kk = 1; kk < r2; kk++) |
---|
1384 | { |
---|
1385 | /* Process Row-0 data 0*/ |
---|
1386 | index = ll*r234+kk*r34; |
---|
1387 | |
---|
1388 | pred1D = (*data)[index-r34]; |
---|
1389 | |
---|
1390 | type_ = type[index]; |
---|
1391 | if (type_ != 0) |
---|
1392 | { |
---|
1393 | (*data)[index] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1394 | } |
---|
1395 | else |
---|
1396 | { |
---|
1397 | // compute resiBits |
---|
1398 | resiBits = 0; |
---|
1399 | if (resiBitsLength != 0) { |
---|
1400 | int kMod8 = k % 8; |
---|
1401 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1402 | if (rightMovSteps > 0) { |
---|
1403 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1404 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1405 | } else if (rightMovSteps < 0) { |
---|
1406 | int code1 = getLeftMovingCode(kMod8); |
---|
1407 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1408 | int leftMovSteps = -rightMovSteps; |
---|
1409 | rightMovSteps = 8 - leftMovSteps; |
---|
1410 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1411 | p++; |
---|
1412 | resiBits = resiBits |
---|
1413 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1414 | } else // rightMovSteps == 0 |
---|
1415 | { |
---|
1416 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1417 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1418 | p++; |
---|
1419 | } |
---|
1420 | k += resiBitsLength; |
---|
1421 | } |
---|
1422 | |
---|
1423 | // recover the exact data |
---|
1424 | memset(curBytes, 0, 4); |
---|
1425 | leadingNum = leadNum[l++]; |
---|
1426 | memcpy(curBytes, preBytes, leadingNum); |
---|
1427 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1428 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1429 | if (resiBitsLength != 0) { |
---|
1430 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1431 | curBytes[reqBytesLength] = resiByte; |
---|
1432 | } |
---|
1433 | |
---|
1434 | exactData = bytesToFloat(curBytes); |
---|
1435 | (*data)[index] = exactData + medianValue; |
---|
1436 | memcpy(preBytes,curBytes,4); |
---|
1437 | } |
---|
1438 | |
---|
1439 | /* Process Row-0 data 1 --> data r4-1 */ |
---|
1440 | for (jj = 1; jj < r4; jj++) |
---|
1441 | { |
---|
1442 | index = ll*r234+kk*r34+jj; |
---|
1443 | |
---|
1444 | pred2D = (*data)[index-1] + (*data)[index-r34] - (*data)[index-r34-1]; |
---|
1445 | |
---|
1446 | type_ = type[index]; |
---|
1447 | if (type_ != 0) |
---|
1448 | { |
---|
1449 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1450 | } |
---|
1451 | else |
---|
1452 | { |
---|
1453 | // compute resiBits |
---|
1454 | resiBits = 0; |
---|
1455 | if (resiBitsLength != 0) { |
---|
1456 | int kMod8 = k % 8; |
---|
1457 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1458 | if (rightMovSteps > 0) { |
---|
1459 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1460 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1461 | } else if (rightMovSteps < 0) { |
---|
1462 | int code1 = getLeftMovingCode(kMod8); |
---|
1463 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1464 | int leftMovSteps = -rightMovSteps; |
---|
1465 | rightMovSteps = 8 - leftMovSteps; |
---|
1466 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1467 | p++; |
---|
1468 | resiBits = resiBits |
---|
1469 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1470 | } else // rightMovSteps == 0 |
---|
1471 | { |
---|
1472 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1473 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1474 | p++; |
---|
1475 | } |
---|
1476 | k += resiBitsLength; |
---|
1477 | } |
---|
1478 | |
---|
1479 | // recover the exact data |
---|
1480 | memset(curBytes, 0, 4); |
---|
1481 | leadingNum = leadNum[l++]; |
---|
1482 | memcpy(curBytes, preBytes, leadingNum); |
---|
1483 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1484 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1485 | if (resiBitsLength != 0) { |
---|
1486 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1487 | curBytes[reqBytesLength] = resiByte; |
---|
1488 | } |
---|
1489 | |
---|
1490 | exactData = bytesToFloat(curBytes); |
---|
1491 | (*data)[index] = exactData + medianValue; |
---|
1492 | memcpy(preBytes,curBytes,4); |
---|
1493 | } |
---|
1494 | } |
---|
1495 | |
---|
1496 | /* Process Row-1 --> Row-r3-1 */ |
---|
1497 | for (ii = 1; ii < r3; ii++) |
---|
1498 | { |
---|
1499 | /* Process Row-i data 0 */ |
---|
1500 | index = ll*r234+kk*r34+ii*r4; |
---|
1501 | |
---|
1502 | pred2D = (*data)[index-r4] + (*data)[index-r34] - (*data)[index-r34-r4]; |
---|
1503 | |
---|
1504 | type_ = type[index]; |
---|
1505 | if (type_ != 0) |
---|
1506 | { |
---|
1507 | (*data)[index] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1508 | } |
---|
1509 | else |
---|
1510 | { |
---|
1511 | // compute resiBits |
---|
1512 | resiBits = 0; |
---|
1513 | if (resiBitsLength != 0) { |
---|
1514 | int kMod8 = k % 8; |
---|
1515 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1516 | if (rightMovSteps > 0) { |
---|
1517 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1518 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1519 | } else if (rightMovSteps < 0) { |
---|
1520 | int code1 = getLeftMovingCode(kMod8); |
---|
1521 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1522 | int leftMovSteps = -rightMovSteps; |
---|
1523 | rightMovSteps = 8 - leftMovSteps; |
---|
1524 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1525 | p++; |
---|
1526 | resiBits = resiBits |
---|
1527 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1528 | } else // rightMovSteps == 0 |
---|
1529 | { |
---|
1530 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1531 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1532 | p++; |
---|
1533 | } |
---|
1534 | k += resiBitsLength; |
---|
1535 | } |
---|
1536 | |
---|
1537 | // recover the exact data |
---|
1538 | memset(curBytes, 0, 4); |
---|
1539 | leadingNum = leadNum[l++]; |
---|
1540 | memcpy(curBytes, preBytes, leadingNum); |
---|
1541 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1542 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1543 | if (resiBitsLength != 0) { |
---|
1544 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1545 | curBytes[reqBytesLength] = resiByte; |
---|
1546 | } |
---|
1547 | |
---|
1548 | exactData = bytesToFloat(curBytes); |
---|
1549 | (*data)[index] = exactData + medianValue; |
---|
1550 | memcpy(preBytes,curBytes,4); |
---|
1551 | } |
---|
1552 | |
---|
1553 | /* Process Row-i data 1 --> data r4-1 */ |
---|
1554 | for (jj = 1; jj < r4; jj++) |
---|
1555 | { |
---|
1556 | index = ll*r234+kk*r34+ii*r4+jj; |
---|
1557 | |
---|
1558 | pred3D = (*data)[index-1] + (*data)[index-r4] + (*data)[index-r34] |
---|
1559 | - (*data)[index-r4-1] - (*data)[index-r34-r4] - (*data)[index-r34-1] + (*data)[index-r34-r4-1]; |
---|
1560 | |
---|
1561 | |
---|
1562 | type_ = type[index]; |
---|
1563 | if (type_ != 0) |
---|
1564 | { |
---|
1565 | (*data)[index] = pred3D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1566 | } |
---|
1567 | else |
---|
1568 | { |
---|
1569 | // compute resiBits |
---|
1570 | resiBits = 0; |
---|
1571 | if (resiBitsLength != 0) { |
---|
1572 | int kMod8 = k % 8; |
---|
1573 | int rightMovSteps = getRightMovingSteps(kMod8, resiBitsLength); |
---|
1574 | if (rightMovSteps > 0) { |
---|
1575 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1576 | resiBits = (tdps->residualMidBits[p] & code) >> rightMovSteps; |
---|
1577 | } else if (rightMovSteps < 0) { |
---|
1578 | int code1 = getLeftMovingCode(kMod8); |
---|
1579 | int code2 = getRightMovingCode(kMod8, resiBitsLength); |
---|
1580 | int leftMovSteps = -rightMovSteps; |
---|
1581 | rightMovSteps = 8 - leftMovSteps; |
---|
1582 | resiBits = (tdps->residualMidBits[p] & code1) << leftMovSteps; |
---|
1583 | p++; |
---|
1584 | resiBits = resiBits |
---|
1585 | | ((tdps->residualMidBits[p] & code2) >> rightMovSteps); |
---|
1586 | } else // rightMovSteps == 0 |
---|
1587 | { |
---|
1588 | int code = getRightMovingCode(kMod8, resiBitsLength); |
---|
1589 | resiBits = (tdps->residualMidBits[p] & code); |
---|
1590 | p++; |
---|
1591 | } |
---|
1592 | k += resiBitsLength; |
---|
1593 | } |
---|
1594 | |
---|
1595 | // recover the exact data |
---|
1596 | memset(curBytes, 0, 4); |
---|
1597 | leadingNum = leadNum[l++]; |
---|
1598 | memcpy(curBytes, preBytes, leadingNum); |
---|
1599 | for (j = leadingNum; j < reqBytesLength; j++) |
---|
1600 | curBytes[j] = tdps->exactMidBytes[curByteIndex++]; |
---|
1601 | if (resiBitsLength != 0) { |
---|
1602 | unsigned char resiByte = (unsigned char) (resiBits << (8 - resiBitsLength)); |
---|
1603 | curBytes[reqBytesLength] = resiByte; |
---|
1604 | } |
---|
1605 | |
---|
1606 | exactData = bytesToFloat(curBytes); |
---|
1607 | (*data)[index] = exactData + medianValue; |
---|
1608 | memcpy(preBytes,curBytes,4); |
---|
1609 | } |
---|
1610 | } |
---|
1611 | } |
---|
1612 | |
---|
1613 | } |
---|
1614 | } |
---|
1615 | |
---|
1616 | //I didn't implement time-based compression for 4D actually. |
---|
1617 | //#ifdef HAVE_TIMECMPR |
---|
1618 | // if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1619 | // memcpy(multisteps->hist_data, (*data), dataSeriesLength*sizeof(float)); |
---|
1620 | //#endif |
---|
1621 | |
---|
1622 | free(leadNum); |
---|
1623 | free(type); |
---|
1624 | return; |
---|
1625 | } |
---|
1626 | |
---|
1627 | void getSnapshotData_float_1D(float** data, size_t dataSeriesLength, TightDataPointStorageF* tdps, int errBoundMode) |
---|
1628 | { |
---|
1629 | size_t i; |
---|
1630 | |
---|
1631 | if (tdps->allSameData) { |
---|
1632 | float value = bytesToFloat(tdps->exactMidBytes); |
---|
1633 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1634 | for (i = 0; i < dataSeriesLength; i++) |
---|
1635 | (*data)[i] = value; |
---|
1636 | } else { |
---|
1637 | if (tdps->rtypeArray == NULL) { |
---|
1638 | if(errBoundMode < PW_REL) |
---|
1639 | { |
---|
1640 | #ifdef HAVE_TIMECMPR |
---|
1641 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1642 | { |
---|
1643 | if(multisteps->compressionType == 0) //snapshot |
---|
1644 | decompressDataSeries_float_1D(data, dataSeriesLength, tdps); |
---|
1645 | else |
---|
1646 | decompressDataSeries_float_1D_ts(data, dataSeriesLength, multisteps, tdps); |
---|
1647 | } |
---|
1648 | else |
---|
1649 | #endif |
---|
1650 | decompressDataSeries_float_1D(data, dataSeriesLength, tdps); |
---|
1651 | } |
---|
1652 | else |
---|
1653 | { |
---|
1654 | //decompressDataSeries_float_1D_pwr(data, dataSeriesLength, tdps); |
---|
1655 | decompressDataSeries_float_1D_pwrgroup(data, dataSeriesLength, tdps); |
---|
1656 | } |
---|
1657 | return; |
---|
1658 | } else { |
---|
1659 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1660 | // insert the reserved values |
---|
1661 | //int[] rtypes = TypeManager.convertByteArray2IntArray_fast_1b( |
---|
1662 | // dataSeriesLength, rtypeArray); |
---|
1663 | int* rtypes; |
---|
1664 | int validLength = computeBitNumRequired(dataSeriesLength); |
---|
1665 | decompressBitArraybySimpleLZ77(&rtypes, tdps->rtypeArray, tdps->rtypeArray_size, dataSeriesLength, validLength); |
---|
1666 | size_t count = 0; |
---|
1667 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1668 | if (rtypes[i] == 1) |
---|
1669 | (*data)[i] = tdps->reservedValue; |
---|
1670 | else |
---|
1671 | count++; |
---|
1672 | } |
---|
1673 | // get the decompressed data |
---|
1674 | float* decmpData; |
---|
1675 | if(errBoundMode < PW_REL) |
---|
1676 | decompressDataSeries_float_1D(&decmpData, dataSeriesLength, tdps); |
---|
1677 | else |
---|
1678 | decompressDataSeries_float_1D_pwr(&decmpData, dataSeriesLength, tdps); |
---|
1679 | // insert the decompressed data |
---|
1680 | size_t k = 0; |
---|
1681 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1682 | if (rtypes[i] == 0) { |
---|
1683 | (*data)[i] = decmpData[k++]; |
---|
1684 | } |
---|
1685 | } |
---|
1686 | free(decmpData); |
---|
1687 | free(rtypes); |
---|
1688 | } |
---|
1689 | } |
---|
1690 | } |
---|
1691 | |
---|
1692 | void getSnapshotData_float_2D(float** data, size_t r1, size_t r2, TightDataPointStorageF* tdps, int errBoundMode) |
---|
1693 | { |
---|
1694 | size_t i; |
---|
1695 | size_t dataSeriesLength = r1*r2; |
---|
1696 | if (tdps->allSameData) { |
---|
1697 | float value = bytesToFloat(tdps->exactMidBytes); |
---|
1698 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1699 | for (i = 0; i < dataSeriesLength; i++) |
---|
1700 | (*data)[i] = value; |
---|
1701 | } else { |
---|
1702 | if (tdps->rtypeArray == NULL) { |
---|
1703 | if(errBoundMode < PW_REL) |
---|
1704 | { |
---|
1705 | #ifdef HAVE_TIMECMPR |
---|
1706 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1707 | { |
---|
1708 | if(multisteps->compressionType == 0) |
---|
1709 | decompressDataSeries_float_2D(data, r1, r2, tdps); |
---|
1710 | else |
---|
1711 | decompressDataSeries_float_1D_ts(data, r1*r2, multisteps, tdps); |
---|
1712 | } |
---|
1713 | else |
---|
1714 | #endif |
---|
1715 | decompressDataSeries_float_2D(data, r1, r2, tdps); |
---|
1716 | } |
---|
1717 | else |
---|
1718 | { |
---|
1719 | decompressDataSeries_float_2D_pwr(data, r1, r2, tdps); |
---|
1720 | } |
---|
1721 | |
---|
1722 | return; |
---|
1723 | } else { |
---|
1724 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1725 | // insert the reserved values |
---|
1726 | //int[] rtypes = TypeManager.convertByteArray2IntArray_fast_1b( |
---|
1727 | // dataSeriesLength, rtypeArray); |
---|
1728 | int* rtypes; |
---|
1729 | int validLength = computeBitNumRequired(dataSeriesLength); |
---|
1730 | decompressBitArraybySimpleLZ77(&rtypes, tdps->rtypeArray, tdps->rtypeArray_size, dataSeriesLength, validLength); |
---|
1731 | size_t count = 0; |
---|
1732 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1733 | if (rtypes[i] == 1) |
---|
1734 | (*data)[i] = tdps->reservedValue; |
---|
1735 | else |
---|
1736 | count++; |
---|
1737 | } |
---|
1738 | // get the decompressed data |
---|
1739 | float* decmpData; |
---|
1740 | if(errBoundMode < PW_REL) |
---|
1741 | decompressDataSeries_float_2D(&decmpData, r1, r2, tdps); |
---|
1742 | else |
---|
1743 | decompressDataSeries_float_2D_pwr(&decmpData, r1, r2, tdps); |
---|
1744 | // insert the decompressed data |
---|
1745 | size_t k = 0; |
---|
1746 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1747 | if (rtypes[i] == 0) { |
---|
1748 | (*data)[i] = decmpData[k++]; |
---|
1749 | } |
---|
1750 | } |
---|
1751 | free(decmpData); |
---|
1752 | free(rtypes); |
---|
1753 | } |
---|
1754 | } |
---|
1755 | } |
---|
1756 | |
---|
1757 | void getSnapshotData_float_3D(float** data, size_t r1, size_t r2, size_t r3, TightDataPointStorageF* tdps, int errBoundMode) |
---|
1758 | { |
---|
1759 | size_t i; |
---|
1760 | size_t dataSeriesLength = r1*r2*r3; |
---|
1761 | if (tdps->allSameData) { |
---|
1762 | float value = bytesToFloat(tdps->exactMidBytes); |
---|
1763 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1764 | for (i = 0; i < dataSeriesLength; i++) |
---|
1765 | (*data)[i] = value; |
---|
1766 | } else { |
---|
1767 | if (tdps->rtypeArray == NULL) { |
---|
1768 | if(errBoundMode < PW_REL) |
---|
1769 | { |
---|
1770 | #ifdef HAVE_TIMECMPR |
---|
1771 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1772 | { |
---|
1773 | if(multisteps->compressionType == 0) |
---|
1774 | decompressDataSeries_float_3D(data, r1, r2, r3, tdps); |
---|
1775 | else |
---|
1776 | decompressDataSeries_float_1D_ts(data, r1*r2*r3, multisteps, tdps); |
---|
1777 | } |
---|
1778 | else |
---|
1779 | #endif |
---|
1780 | decompressDataSeries_float_3D(data, r1, r2, r3, tdps); |
---|
1781 | } |
---|
1782 | else |
---|
1783 | { |
---|
1784 | decompressDataSeries_float_3D_pwr(data, r1, r2, r3, tdps); |
---|
1785 | } |
---|
1786 | |
---|
1787 | return; |
---|
1788 | } else { |
---|
1789 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1790 | // insert the reserved values |
---|
1791 | //int[] rtypes = TypeManager.convertByteArray2IntArray_fast_1b( |
---|
1792 | // dataSeriesLength, rtypeArray); |
---|
1793 | int* rtypes; |
---|
1794 | int validLength = computeBitNumRequired(dataSeriesLength); |
---|
1795 | decompressBitArraybySimpleLZ77(&rtypes, tdps->rtypeArray, tdps->rtypeArray_size, dataSeriesLength, validLength); |
---|
1796 | size_t count = 0; |
---|
1797 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1798 | if (rtypes[i] == 1) |
---|
1799 | (*data)[i] = tdps->reservedValue; |
---|
1800 | else |
---|
1801 | count++; |
---|
1802 | } |
---|
1803 | // get the decompressed data |
---|
1804 | float* decmpData; |
---|
1805 | if(errBoundMode < PW_REL) |
---|
1806 | decompressDataSeries_float_3D(&decmpData, r1, r2, r3, tdps); |
---|
1807 | else |
---|
1808 | decompressDataSeries_float_3D_pwr(&decmpData, r1, r2, r3, tdps); |
---|
1809 | // insert the decompressed data |
---|
1810 | size_t k = 0; |
---|
1811 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1812 | if (rtypes[i] == 0) { |
---|
1813 | (*data)[i] = decmpData[k++]; |
---|
1814 | } |
---|
1815 | } |
---|
1816 | free(decmpData); |
---|
1817 | free(rtypes); |
---|
1818 | } |
---|
1819 | } |
---|
1820 | } |
---|
1821 | |
---|
1822 | void getSnapshotData_float_4D(float** data, size_t r1, size_t r2, size_t r3, size_t r4, TightDataPointStorageF* tdps, int errBoundMode) |
---|
1823 | { |
---|
1824 | size_t i; |
---|
1825 | size_t dataSeriesLength = r1*r2*r3*r4; |
---|
1826 | if (tdps->allSameData) { |
---|
1827 | float value = bytesToFloat(tdps->exactMidBytes); |
---|
1828 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1829 | for (i = 0; i < dataSeriesLength; i++) |
---|
1830 | (*data)[i] = value; |
---|
1831 | } else { |
---|
1832 | if (tdps->rtypeArray == NULL) { |
---|
1833 | if(errBoundMode < PW_REL) |
---|
1834 | { |
---|
1835 | #ifdef HAVE_TIMECMPR |
---|
1836 | if(confparams_dec->szMode == SZ_TEMPORAL_COMPRESSION) |
---|
1837 | { |
---|
1838 | if(multisteps->compressionType == 0) |
---|
1839 | decompressDataSeries_float_4D(data, r1, r2, r3, r4, tdps); |
---|
1840 | else |
---|
1841 | decompressDataSeries_float_1D_ts(data, r1*r2*r3*r4, multisteps, tdps); |
---|
1842 | } |
---|
1843 | else |
---|
1844 | #endif |
---|
1845 | decompressDataSeries_float_4D(data, r1, r2, r3, r4, tdps); |
---|
1846 | } |
---|
1847 | else |
---|
1848 | { |
---|
1849 | decompressDataSeries_float_3D_pwr(data, r1*r2, r3, r4, tdps); |
---|
1850 | //ToDO |
---|
1851 | //decompressDataSeries_float_4D_pwr(data, r1, r2, r3, r4, tdps); |
---|
1852 | } |
---|
1853 | return; |
---|
1854 | } else { |
---|
1855 | *data = (float*)malloc(sizeof(float)*dataSeriesLength); |
---|
1856 | int* rtypes; |
---|
1857 | int validLength = computeBitNumRequired(dataSeriesLength); |
---|
1858 | decompressBitArraybySimpleLZ77(&rtypes, tdps->rtypeArray, tdps->rtypeArray_size, dataSeriesLength, validLength); |
---|
1859 | size_t count = 0; |
---|
1860 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1861 | if (rtypes[i] == 1) |
---|
1862 | (*data)[i] = tdps->reservedValue; |
---|
1863 | else |
---|
1864 | count++; |
---|
1865 | } |
---|
1866 | // get the decompressed data |
---|
1867 | float* decmpData; |
---|
1868 | if(errBoundMode < PW_REL) |
---|
1869 | decompressDataSeries_float_4D(&decmpData, r1, r2, r3, r4, tdps); |
---|
1870 | else |
---|
1871 | decompressDataSeries_float_3D_pwr(&decmpData, r1*r2, r3, r4, tdps); |
---|
1872 | //ToDO |
---|
1873 | //decompressDataSeries_float_4D_pwr(&decompData, r1, r2, r3, r4, tdps); |
---|
1874 | // insert the decompressed data |
---|
1875 | size_t k = 0; |
---|
1876 | for (i = 0; i < dataSeriesLength; i++) { |
---|
1877 | if (rtypes[i] == 0) { |
---|
1878 | (*data)[i] = decmpData[k++]; |
---|
1879 | } |
---|
1880 | } |
---|
1881 | free(decmpData); |
---|
1882 | free(rtypes); |
---|
1883 | } |
---|
1884 | } |
---|
1885 | } |
---|
1886 | |
---|
1887 | size_t decompressDataSeries_float_3D_RA_block(float * data, float mean, size_t dim_0, size_t dim_1, size_t dim_2, size_t block_dim_0, size_t block_dim_1, size_t block_dim_2, double realPrecision, int * type, float * unpredictable_data){ |
---|
1888 | |
---|
1889 | size_t dim0_offset = dim_1 * dim_2; |
---|
1890 | size_t dim1_offset = dim_2; |
---|
1891 | // printf("SZ_compress_float_3D_MDQ_RA_block real dim: %d %d %d\n", real_block_dims[0], real_block_dims[1], real_block_dims[2]); |
---|
1892 | // fflush(stdout); |
---|
1893 | |
---|
1894 | size_t unpredictable_count = 0; |
---|
1895 | size_t r1, r2, r3; |
---|
1896 | r1 = block_dim_0; |
---|
1897 | r2 = block_dim_1; |
---|
1898 | r3 = block_dim_2; |
---|
1899 | |
---|
1900 | float * cur_data_pos = data; |
---|
1901 | float * last_row_pos; |
---|
1902 | float pred1D, pred2D, pred3D; |
---|
1903 | size_t i, j, k; |
---|
1904 | size_t r23 = r2*r3; |
---|
1905 | int type_; |
---|
1906 | // Process Row-0 data 0 |
---|
1907 | pred1D = mean; |
---|
1908 | type_ = type[0]; |
---|
1909 | // printf("Type 0 %d, mean %.4f\n", type_, mean); |
---|
1910 | if (type_ != 0){ |
---|
1911 | cur_data_pos[0] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1912 | } |
---|
1913 | else{ |
---|
1914 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
1915 | } |
---|
1916 | |
---|
1917 | /* Process Row-0 data 1*/ |
---|
1918 | pred1D = cur_data_pos[0]; |
---|
1919 | type_ = type[1]; |
---|
1920 | if (type_ != 0){ |
---|
1921 | cur_data_pos[1] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1922 | } |
---|
1923 | else{ |
---|
1924 | cur_data_pos[1] = unpredictable_data[unpredictable_count ++]; |
---|
1925 | } |
---|
1926 | /* Process Row-0 data 2 --> data r3-1 */ |
---|
1927 | for (j = 2; j < r3; j++){ |
---|
1928 | pred1D = 2*cur_data_pos[j-1] - cur_data_pos[j-2]; |
---|
1929 | type_ = type[j]; |
---|
1930 | if (type_ != 0){ |
---|
1931 | cur_data_pos[j] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1932 | } |
---|
1933 | else{ |
---|
1934 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
1935 | } |
---|
1936 | } |
---|
1937 | |
---|
1938 | last_row_pos = cur_data_pos; |
---|
1939 | cur_data_pos += dim1_offset; |
---|
1940 | // printf("SZ_compress_float_3D_MDQ_RA_block row 0 done, cur_data_pos: %ld\n", cur_data_pos - block_ori_data); |
---|
1941 | // fflush(stdout); |
---|
1942 | |
---|
1943 | /* Process Row-1 --> Row-r2-1 */ |
---|
1944 | size_t index; |
---|
1945 | for (i = 1; i < r2; i++) |
---|
1946 | { |
---|
1947 | /* Process row-i data 0 */ |
---|
1948 | index = i*r3; |
---|
1949 | pred1D = last_row_pos[0]; |
---|
1950 | type_ = type[index]; |
---|
1951 | if (type_ != 0){ |
---|
1952 | cur_data_pos[0] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1953 | } |
---|
1954 | else{ |
---|
1955 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
1956 | } |
---|
1957 | /* Process row-i data 1 --> data r3-1*/ |
---|
1958 | for (j = 1; j < r3; j++) |
---|
1959 | { |
---|
1960 | index = i*r3+j; |
---|
1961 | pred2D = cur_data_pos[j-1] + last_row_pos[j] - last_row_pos[j-1]; |
---|
1962 | type_ = type[index]; |
---|
1963 | if (type_ != 0){ |
---|
1964 | cur_data_pos[j] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1965 | } |
---|
1966 | else{ |
---|
1967 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
1968 | } |
---|
1969 | // printf("pred2D %.2f cur_data %.2f last_row_data %.2f %.2f, result %.2f\n", pred2D, cur_data_pos[j-1], last_row_pos[j], last_row_pos[j-1], cur_data_pos[j]); |
---|
1970 | // getchar(); |
---|
1971 | } |
---|
1972 | last_row_pos = cur_data_pos; |
---|
1973 | cur_data_pos += dim1_offset; |
---|
1974 | } |
---|
1975 | cur_data_pos += dim0_offset - r2 * dim1_offset; |
---|
1976 | |
---|
1977 | // printf("SZ_compress_float_3D_MDQ_RA_block layer 0 done, cur_data_pos: %ld\n", cur_data_pos - block_ori_data); |
---|
1978 | // fflush(stdout); |
---|
1979 | // exit(0); |
---|
1980 | |
---|
1981 | /////////////////////////// Process layer-1 --> layer-r1-1 /////////////////////////// |
---|
1982 | |
---|
1983 | for (k = 1; k < r1; k++) |
---|
1984 | { |
---|
1985 | // if(idx == 63 && idy == 63 && idz == 63){ |
---|
1986 | // printf("SZ_compress_float_3D_MDQ_RA_block layer %d done, cur_data_pos: %ld\n", k-1, cur_data_pos - data); |
---|
1987 | // fflush(stdout); |
---|
1988 | // } |
---|
1989 | /* Process Row-0 data 0*/ |
---|
1990 | index = k*r23; |
---|
1991 | pred1D = cur_data_pos[- dim0_offset]; |
---|
1992 | type_ = type[index]; |
---|
1993 | if (type_ != 0){ |
---|
1994 | cur_data_pos[0] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
1995 | } |
---|
1996 | else{ |
---|
1997 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
1998 | } |
---|
1999 | /* Process Row-0 data 1 --> data r3-1 */ |
---|
2000 | for (j = 1; j < r3; j++) |
---|
2001 | { |
---|
2002 | //index = k*r2*r3+j; |
---|
2003 | index ++; |
---|
2004 | pred2D = cur_data_pos[j-1] + cur_data_pos[j - dim0_offset] - cur_data_pos[j - 1 - dim0_offset]; |
---|
2005 | type_ = type[index]; |
---|
2006 | if (type_ != 0){ |
---|
2007 | cur_data_pos[j] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2008 | } |
---|
2009 | else{ |
---|
2010 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
2011 | } |
---|
2012 | // printf("pred2D %.2f cur_data %.2f %.2f %.2f, result %.2f\n", pred2D, cur_data_pos[j-1], cur_data_pos[j - dim0_offset], cur_data_pos[j - 1 - dim0_offset], cur_data_pos[j]); |
---|
2013 | // getchar(); |
---|
2014 | } |
---|
2015 | last_row_pos = cur_data_pos; |
---|
2016 | cur_data_pos += dim1_offset; |
---|
2017 | |
---|
2018 | // if(idx == 63 && idy == 63 && idz == 63){ |
---|
2019 | // printf("SZ_compress_float_3D_MDQ_RA_block layer row 0 done, cur_data_pos: %ld\n", k-1, cur_data_pos - data); |
---|
2020 | // fflush(stdout); |
---|
2021 | // } |
---|
2022 | |
---|
2023 | /* Process Row-1 --> Row-r2-1 */ |
---|
2024 | for (i = 1; i < r2; i++) |
---|
2025 | { |
---|
2026 | // if(idx == 63 && idy == 63 && idz == 63){ |
---|
2027 | // printf("SZ_compress_float_3D_MDQ_RA_block layer row %d done, cur_data_pos: %ld\n", i-1, cur_data_pos - data); |
---|
2028 | // fflush(stdout); |
---|
2029 | // } |
---|
2030 | /* Process Row-i data 0 */ |
---|
2031 | index = k*r23 + i*r3; |
---|
2032 | pred2D = last_row_pos[0] + cur_data_pos[- dim0_offset] - last_row_pos[- dim0_offset]; |
---|
2033 | type_ = type[index]; |
---|
2034 | if (type_ != 0){ |
---|
2035 | cur_data_pos[0] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2036 | } |
---|
2037 | else{ |
---|
2038 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
2039 | } |
---|
2040 | |
---|
2041 | /* Process Row-i data 1 --> data r3-1 */ |
---|
2042 | for (j = 1; j < r3; j++) |
---|
2043 | { |
---|
2044 | // if(k==63&&i==43&&j==27) |
---|
2045 | // printf("i=%d\n", i); |
---|
2046 | //index = k*r2*r3 + i*r3 + j; |
---|
2047 | index ++; |
---|
2048 | pred3D = cur_data_pos[j-1] + last_row_pos[j]+ cur_data_pos[j - dim0_offset] - last_row_pos[j-1] - last_row_pos[j - dim0_offset] - cur_data_pos[j-1 - dim0_offset] + last_row_pos[j-1 - dim0_offset]; |
---|
2049 | type_ = type[index]; |
---|
2050 | if (type_ != 0){ |
---|
2051 | cur_data_pos[j] = pred3D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2052 | } |
---|
2053 | else{ |
---|
2054 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
2055 | } |
---|
2056 | } |
---|
2057 | last_row_pos = cur_data_pos; |
---|
2058 | cur_data_pos += dim1_offset; |
---|
2059 | } |
---|
2060 | cur_data_pos += dim0_offset - r2 * dim1_offset; |
---|
2061 | } |
---|
2062 | |
---|
2063 | return unpredictable_count; |
---|
2064 | } |
---|
2065 | |
---|
2066 | size_t decompressDataSeries_float_1D_RA_block(float * data, float mean, size_t dim_0, size_t block_dim_0, double realPrecision, int * type, float * unpredictable_data){ |
---|
2067 | |
---|
2068 | size_t unpredictable_count = 0; |
---|
2069 | |
---|
2070 | float * cur_data_pos = data; |
---|
2071 | size_t type_index = 0; |
---|
2072 | int type_; |
---|
2073 | float last_over_thres = mean; |
---|
2074 | for(size_t i=0; i<block_dim_0; i++){ |
---|
2075 | type_ = type[type_index]; |
---|
2076 | if(type_ == 0){ |
---|
2077 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
2078 | last_over_thres = cur_data_pos[0]; |
---|
2079 | } |
---|
2080 | else{ |
---|
2081 | cur_data_pos[0] = last_over_thres + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2082 | last_over_thres = cur_data_pos[0]; |
---|
2083 | } |
---|
2084 | |
---|
2085 | type_index ++; |
---|
2086 | cur_data_pos ++; |
---|
2087 | } |
---|
2088 | |
---|
2089 | return unpredictable_count; |
---|
2090 | } |
---|
2091 | |
---|
2092 | size_t decompressDataSeries_float_2D_RA_block(float * data, float mean, size_t dim_0, size_t dim_1, size_t block_dim_0, size_t block_dim_1, double realPrecision, int * type, float * unpredictable_data){ |
---|
2093 | |
---|
2094 | size_t dim0_offset = dim_1; |
---|
2095 | // printf("SZ_compress_float_3D_MDQ_RA_block real dim: %d %d %d\n", real_block_dims[0], real_block_dims[1], real_block_dims[2]); |
---|
2096 | // fflush(stdout); |
---|
2097 | |
---|
2098 | size_t unpredictable_count = 0; |
---|
2099 | size_t r1, r2; |
---|
2100 | r1 = block_dim_0; |
---|
2101 | r2 = block_dim_1; |
---|
2102 | |
---|
2103 | float * cur_data_pos = data; |
---|
2104 | float * last_row_pos; |
---|
2105 | float pred1D, pred2D; |
---|
2106 | size_t i, j; |
---|
2107 | int type_; |
---|
2108 | // Process Row-0 data 0 |
---|
2109 | pred1D = mean; |
---|
2110 | type_ = type[0]; |
---|
2111 | // printf("Type 0 %d, mean %.4f\n", type_, mean); |
---|
2112 | if (type_ != 0){ |
---|
2113 | cur_data_pos[0] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2114 | } |
---|
2115 | else{ |
---|
2116 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
2117 | } |
---|
2118 | |
---|
2119 | /* Process Row-0 data 1*/ |
---|
2120 | pred1D = cur_data_pos[0]; |
---|
2121 | type_ = type[1]; |
---|
2122 | if (type_ != 0){ |
---|
2123 | cur_data_pos[1] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2124 | } |
---|
2125 | else{ |
---|
2126 | cur_data_pos[1] = unpredictable_data[unpredictable_count ++]; |
---|
2127 | } |
---|
2128 | /* Process Row-0 data 2 --> data r3-1 */ |
---|
2129 | for (j = 2; j < r2; j++){ |
---|
2130 | pred1D = 2*cur_data_pos[j-1] - cur_data_pos[j-2]; |
---|
2131 | type_ = type[j]; |
---|
2132 | if (type_ != 0){ |
---|
2133 | cur_data_pos[j] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2134 | } |
---|
2135 | else{ |
---|
2136 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
2137 | } |
---|
2138 | } |
---|
2139 | |
---|
2140 | last_row_pos = cur_data_pos; |
---|
2141 | cur_data_pos += dim0_offset; |
---|
2142 | // printf("SZ_compress_float_3D_MDQ_RA_block row 0 done, cur_data_pos: %ld\n", cur_data_pos - block_ori_data); |
---|
2143 | // fflush(stdout); |
---|
2144 | |
---|
2145 | /* Process Row-1 --> Row-r2-1 */ |
---|
2146 | size_t index; |
---|
2147 | for (i = 1; i < r1; i++) |
---|
2148 | { |
---|
2149 | /* Process row-i data 0 */ |
---|
2150 | index = i*r2; |
---|
2151 | type_ = type[index]; |
---|
2152 | if (type_ != 0){ |
---|
2153 | pred1D = last_row_pos[0]; |
---|
2154 | cur_data_pos[0] = pred1D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2155 | } |
---|
2156 | else{ |
---|
2157 | cur_data_pos[0] = unpredictable_data[unpredictable_count ++]; |
---|
2158 | } |
---|
2159 | /* Process row-i data 1 --> data r3-1*/ |
---|
2160 | for (j = 1; j < r2; j++) |
---|
2161 | { |
---|
2162 | index = i*r2+j; |
---|
2163 | pred2D = cur_data_pos[j-1] + last_row_pos[j] - last_row_pos[j-1]; |
---|
2164 | type_ = type[index]; |
---|
2165 | if (type_ != 0){ |
---|
2166 | cur_data_pos[j] = pred2D + 2 * (type_ - exe_params->intvRadius) * realPrecision; |
---|
2167 | } |
---|
2168 | else{ |
---|
2169 | cur_data_pos[j] = unpredictable_data[unpredictable_count ++]; |
---|
2170 | } |
---|
2171 | // printf("pred2D %.2f cur_data %.2f last_row_data %.2f %.2f, result %.2f\n", pred2D, cur_data_pos[j-1], last_row_pos[j], last_row_pos[j-1], cur_data_pos[j]); |
---|
2172 | // getchar(); |
---|
2173 | } |
---|
2174 | last_row_pos = cur_data_pos; |
---|
2175 | cur_data_pos += dim0_offset; |
---|
2176 | } |
---|
2177 | return unpredictable_count; |
---|
2178 | } |
---|
2179 | |
---|