[2c47b73] | 1 | /** |
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| 2 | * @file TightPointDataStorageF.c |
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| 3 | * @author Sheng Di and Dingwen Tao |
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| 4 | * @date Aug, 2016 |
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| 5 | * @brief The functions used to construct the tightPointDataStorage element for storing compressed bytes. |
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| 6 | * (C) 2016 by Mathematics and Computer Science (MCS), Argonne National Laboratory. |
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| 7 | * See COPYRIGHT in top-level directory. |
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| 8 | */ |
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| 9 | |
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| 10 | #include <stdlib.h> |
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| 11 | #include <stdio.h> |
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| 12 | #include <string.h> |
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| 13 | #include "TightDataPointStorageF.h" |
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| 14 | #include "sz.h" |
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| 15 | #include "Huffman.h" |
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| 16 | //#include "rw.h" |
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| 17 | |
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| 18 | void new_TightDataPointStorageF_Empty(TightDataPointStorageF **this) |
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| 19 | { |
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| 20 | *this = (TightDataPointStorageF*)malloc(sizeof(TightDataPointStorageF)); |
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| 21 | (*this)->dataSeriesLength = 0; |
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| 22 | (*this)->allSameData = 0; |
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| 23 | (*this)->exactDataNum = 0; |
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| 24 | (*this)->reservedValue = 0; |
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| 25 | (*this)->reqLength = 0; |
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| 26 | (*this)->radExpo = 0; |
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| 27 | |
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| 28 | (*this)->rtypeArray = NULL; |
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| 29 | (*this)->rtypeArray_size = 0; |
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| 30 | |
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| 31 | (*this)->typeArray = NULL; //its size is dataSeriesLength/4 (or xxx/4+1) |
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| 32 | (*this)->typeArray_size = 0; |
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| 33 | |
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| 34 | (*this)->leadNumArray = NULL; //its size is exactDataNum/4 (or exactDataNum/4+1) |
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| 35 | (*this)->leadNumArray_size = 0; |
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| 36 | |
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| 37 | (*this)->exactMidBytes = NULL; |
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| 38 | (*this)->exactMidBytes_size = 0; |
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| 39 | |
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| 40 | (*this)->residualMidBits = NULL; |
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| 41 | (*this)->residualMidBits_size = 0; |
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| 42 | |
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| 43 | (*this)->intervals = 0; |
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| 44 | (*this)->isLossless = 0; |
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| 45 | |
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| 46 | (*this)->segment_size = 0; |
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| 47 | (*this)->pwrErrBoundBytes = NULL; |
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| 48 | (*this)->pwrErrBoundBytes_size = 0; |
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| 49 | } |
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| 50 | |
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| 51 | int new_TightDataPointStorageF_fromFlatBytes(TightDataPointStorageF **this, unsigned char* flatBytes, size_t flatBytesLength) |
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| 52 | { |
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| 53 | new_TightDataPointStorageF_Empty(this); |
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| 54 | size_t i, index = 0; |
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| 55 | size_t pwrErrBoundBytes_size = 0, segmentL = 0, radExpoL = 0, pwrErrBoundBytesL = 0; |
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| 56 | char version[3]; |
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| 57 | for (i = 0; i < 3; i++) |
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| 58 | version[i] = flatBytes[index++]; //3 |
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| 59 | unsigned char sameRByte = flatBytes[index++]; //1 |
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| 60 | if(checkVersion(version)!=1) |
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| 61 | { |
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| 62 | //wrong version |
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| 63 | printf("Wrong version: \nCompressed-data version (%d.%d.%d)\n",version[0], version[1], version[2]); |
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| 64 | printf("Current sz version: (%d.%d.%d)\n", versionNumber[0], versionNumber[1], versionNumber[2]); |
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| 65 | printf("Please double-check if the compressed data (or file) is correct.\n"); |
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| 66 | exit(0); |
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| 67 | } |
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| 68 | int same = sameRByte & 0x01; |
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| 69 | //confparams_dec->szMode = (sameRByte & 0x06)>>1; |
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| 70 | (*this)->isLossless = (sameRByte & 0x10)>>4; |
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| 71 | int isPW_REL = (sameRByte & 0x20)>>5; |
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| 72 | exe_params->SZ_SIZE_TYPE = ((sameRByte & 0x40)>>6)==1?8:4; |
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| 73 | int errorBoundMode = ABS; |
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| 74 | if(isPW_REL) |
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| 75 | { |
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| 76 | errorBoundMode = PW_REL; |
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| 77 | segmentL = exe_params->SZ_SIZE_TYPE; |
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| 78 | pwrErrBoundBytesL = 4; |
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| 79 | } |
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| 80 | |
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| 81 | sz_params* params = convertBytesToSZParams(&(flatBytes[index])); |
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| 82 | int mode = confparams_dec->szMode; |
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| 83 | int predictionMode = confparams_dec->predictionMode; |
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| 84 | if(confparams_dec!=NULL) |
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| 85 | free(confparams_dec); |
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| 86 | confparams_dec = params; |
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| 87 | confparams_dec->szMode = mode; |
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| 88 | if(mode==SZ_TEMPORAL_COMPRESSION) |
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| 89 | { |
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| 90 | confparams_dec->szMode = SZ_TEMPORAL_COMPRESSION; |
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| 91 | confparams_dec->predictionMode = predictionMode; |
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| 92 | } |
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| 93 | |
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| 94 | index += MetaDataByteLength; |
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| 95 | |
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| 96 | unsigned char dsLengthBytes[8]; |
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| 97 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 98 | dsLengthBytes[i] = flatBytes[index++]; |
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| 99 | (*this)->dataSeriesLength = bytesToSize(dsLengthBytes);// 4 or 8 |
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| 100 | |
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| 101 | if((*this)->isLossless==1) |
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| 102 | { |
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| 103 | //(*this)->exactMidBytes = flatBytes+8; |
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| 104 | return errorBoundMode; |
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| 105 | } |
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| 106 | else if(same==1) |
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| 107 | { |
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| 108 | (*this)->allSameData = 1; |
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| 109 | size_t exactMidBytesLength = sizeof(float); //flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE; |
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| 110 | if(exactMidBytesLength>0) |
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| 111 | (*this)->exactMidBytes = (unsigned char*)malloc(sizeof(unsigned char)*exactMidBytesLength); |
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| 112 | else |
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| 113 | (*this)->exactMidBytes = NULL; |
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| 114 | for(i = 0;i<exactMidBytesLength;i++) |
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| 115 | (*this)->exactMidBytes[i] = flatBytes[index++]; |
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| 116 | return errorBoundMode; |
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| 117 | } |
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| 118 | else |
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| 119 | (*this)->allSameData = 0; |
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| 120 | |
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| 121 | int rtype_ = sameRByte & 0x08; //=00001000 |
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| 122 | unsigned char byteBuf[8]; |
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| 123 | |
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| 124 | for (i = 0; i < 4; i++) |
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| 125 | byteBuf[i] = flatBytes[index++]; |
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| 126 | int max_quant_intervals = bytesToInt_bigEndian(byteBuf);// 4 |
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| 127 | |
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| 128 | confparams_dec->maxRangeRadius = max_quant_intervals/2; |
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| 129 | |
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| 130 | if(errorBoundMode>=PW_REL) |
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| 131 | { |
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| 132 | (*this)->radExpo = flatBytes[index++];//1 |
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| 133 | radExpoL = 1; |
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| 134 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 135 | byteBuf[i] = flatBytes[index++]; |
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| 136 | params->segment_size = (*this)->segment_size = bytesToSize(byteBuf);// exe_params->SZ_SIZE_TYPE |
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| 137 | |
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| 138 | for (i = 0; i < 4; i++) |
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| 139 | byteBuf[i] = flatBytes[index++]; |
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| 140 | pwrErrBoundBytes_size = (*this)->pwrErrBoundBytes_size = bytesToInt_bigEndian(byteBuf);// 4 |
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| 141 | } |
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| 142 | else |
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| 143 | { |
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| 144 | pwrErrBoundBytes_size = 0; |
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| 145 | (*this)->pwrErrBoundBytes = NULL; |
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| 146 | } |
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| 147 | for (i = 0; i < 4; i++) |
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| 148 | byteBuf[i] = flatBytes[index++]; |
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| 149 | (*this)->intervals = bytesToInt_bigEndian(byteBuf);// 4 |
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| 150 | |
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| 151 | for (i = 0; i < 4; i++) |
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| 152 | byteBuf[i] = flatBytes[index++]; |
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| 153 | (*this)->medianValue = bytesToFloat(byteBuf); //4 |
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| 154 | |
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| 155 | (*this)->reqLength = flatBytes[index++]; //1 |
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| 156 | |
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| 157 | for (i = 0; i < 8; i++) |
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| 158 | byteBuf[i] = flatBytes[index++]; |
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| 159 | (*this)->realPrecision = bytesToDouble(byteBuf);//8 |
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| 160 | |
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| 161 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 162 | byteBuf[i] = flatBytes[index++]; |
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| 163 | (*this)->typeArray_size = bytesToSize(byteBuf);// 4 |
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| 164 | if(rtype_!=0) |
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| 165 | { |
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| 166 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++) |
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| 167 | byteBuf[i] = flatBytes[index++]; |
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| 168 | (*this)->rtypeArray_size = bytesToSize(byteBuf);//(ST) |
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| 169 | } |
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| 170 | else |
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| 171 | (*this)->rtypeArray_size = 0; |
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| 172 | |
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| 173 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 174 | byteBuf[i] = flatBytes[index++]; |
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| 175 | (*this)->exactDataNum = bytesToSize(byteBuf);// ST |
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| 176 | |
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| 177 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 178 | byteBuf[i] = flatBytes[index++]; |
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| 179 | (*this)->exactMidBytes_size = bytesToSize(byteBuf);// ST |
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| 180 | |
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| 181 | if (rtype_ != 0) { |
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| 182 | if((*this)->rtypeArray_size>0) |
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| 183 | (*this)->rtypeArray = (unsigned char*)malloc(sizeof(unsigned char)*(*this)->rtypeArray_size); |
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| 184 | else |
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| 185 | (*this)->rtypeArray = NULL; |
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| 186 | |
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| 187 | for (i = 0; i < 4; i++) |
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| 188 | byteBuf[i] = flatBytes[index++]; |
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| 189 | (*this)->reservedValue = bytesToFloat(byteBuf);//4 |
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| 190 | } |
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| 191 | |
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| 192 | size_t logicLeadNumBitsNum = (*this)->exactDataNum * 2; |
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| 193 | if (logicLeadNumBitsNum % 8 == 0) |
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| 194 | { |
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| 195 | (*this)->leadNumArray_size = logicLeadNumBitsNum >> 3; |
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| 196 | } |
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| 197 | else |
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| 198 | { |
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| 199 | (*this)->leadNumArray_size = (logicLeadNumBitsNum >> 3) + 1; |
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| 200 | } |
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| 201 | |
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| 202 | if ((*this)->rtypeArray != NULL) |
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| 203 | { |
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| 204 | (*this)->residualMidBits_size = flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE - 4 - radExpoL - segmentL - pwrErrBoundBytesL - 4 - 4 - 1 - 8 |
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| 205 | - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - 4 - (*this)->rtypeArray_size |
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| 206 | - (*this)->typeArray_size - (*this)->leadNumArray_size |
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| 207 | - (*this)->exactMidBytes_size - pwrErrBoundBytes_size; |
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| 208 | for (i = 0; i < (*this)->rtypeArray_size; i++) |
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| 209 | (*this)->rtypeArray[i] = flatBytes[index++]; |
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| 210 | } |
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| 211 | else |
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| 212 | { |
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| 213 | (*this)->residualMidBits_size = flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE - 4 - radExpoL - segmentL - pwrErrBoundBytesL - 4 - 4 - 1 - 8 |
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| 214 | - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - (*this)->typeArray_size |
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| 215 | - (*this)->leadNumArray_size - (*this)->exactMidBytes_size - pwrErrBoundBytes_size; |
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| 216 | } |
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| 217 | |
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| 218 | (*this)->typeArray = &flatBytes[index]; |
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| 219 | //retrieve the number of states (i.e., stateNum) |
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| 220 | (*this)->allNodes = bytesToInt_bigEndian((*this)->typeArray); //the first 4 bytes store the stateNum |
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| 221 | (*this)->stateNum = ((*this)->allNodes+1)/2; |
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| 222 | |
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| 223 | index+=(*this)->typeArray_size; |
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| 224 | |
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| 225 | (*this)->pwrErrBoundBytes = &flatBytes[index]; |
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| 226 | |
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| 227 | index+=pwrErrBoundBytes_size; |
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| 228 | |
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| 229 | (*this)->leadNumArray = &flatBytes[index]; |
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| 230 | |
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| 231 | index+=(*this)->leadNumArray_size; |
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| 232 | |
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| 233 | (*this)->exactMidBytes = &flatBytes[index]; |
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| 234 | |
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| 235 | index+=(*this)->exactMidBytes_size; |
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| 236 | |
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| 237 | (*this)->residualMidBits = &flatBytes[index]; |
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| 238 | |
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| 239 | //index+=(*this)->residualMidBits_size; |
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| 240 | |
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| 241 | return errorBoundMode; |
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| 242 | } |
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| 243 | |
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| 244 | /** |
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| 245 | * |
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| 246 | * type's length == dataSeriesLength |
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| 247 | * exactMidBytes's length == exactMidBytes_size |
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| 248 | * leadNumIntArray's length == exactDataNum |
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| 249 | * escBytes's length == escBytes_size |
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| 250 | * resiBitLength's length == resiBitLengthSize |
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| 251 | * */ |
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| 252 | void new_TightDataPointStorageF(TightDataPointStorageF **this, |
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| 253 | size_t dataSeriesLength, size_t exactDataNum, |
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| 254 | int* type, unsigned char* exactMidBytes, size_t exactMidBytes_size, |
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| 255 | unsigned char* leadNumIntArray, //leadNumIntArray contains readable numbers.... |
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| 256 | unsigned char* resiMidBits, size_t resiMidBits_size, |
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| 257 | unsigned char resiBitLength, |
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| 258 | double realPrecision, float medianValue, char reqLength, unsigned int intervals, |
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| 259 | unsigned char* pwrErrBoundBytes, size_t pwrErrBoundBytes_size, unsigned char radExpo) { |
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| 260 | |
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| 261 | *this = (TightDataPointStorageF *)malloc(sizeof(TightDataPointStorageF)); |
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| 262 | (*this)->allSameData = 0; |
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| 263 | (*this)->realPrecision = realPrecision; |
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| 264 | (*this)->medianValue = medianValue; |
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| 265 | (*this)->reqLength = reqLength; |
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| 266 | |
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| 267 | (*this)->dataSeriesLength = dataSeriesLength; |
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| 268 | (*this)->exactDataNum = exactDataNum; |
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| 269 | |
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| 270 | (*this)->rtypeArray = NULL; |
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| 271 | (*this)->rtypeArray_size = 0; |
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| 272 | |
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| 273 | int stateNum = 2*intervals; |
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| 274 | HuffmanTree* huffmanTree = createHuffmanTree(stateNum); |
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| 275 | encode_withTree(huffmanTree, type, dataSeriesLength, &(*this)->typeArray, &(*this)->typeArray_size); |
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| 276 | SZ_ReleaseHuffman(huffmanTree); |
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| 277 | |
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| 278 | (*this)->exactMidBytes = exactMidBytes; |
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| 279 | (*this)->exactMidBytes_size = exactMidBytes_size; |
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| 280 | |
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| 281 | (*this)->leadNumArray_size = convertIntArray2ByteArray_fast_2b(leadNumIntArray, exactDataNum, &((*this)->leadNumArray)); |
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| 282 | |
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| 283 | (*this)->residualMidBits_size = convertIntArray2ByteArray_fast_dynamic(resiMidBits, resiBitLength, exactDataNum, &((*this)->residualMidBits)); |
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| 284 | |
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| 285 | (*this)->intervals = intervals; |
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| 286 | |
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| 287 | (*this)->isLossless = 0; |
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| 288 | |
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| 289 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 290 | (*this)->pwrErrBoundBytes = pwrErrBoundBytes; |
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| 291 | else |
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| 292 | (*this)->pwrErrBoundBytes = NULL; |
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| 293 | |
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| 294 | (*this)->radExpo = radExpo; |
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| 295 | |
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| 296 | (*this)->pwrErrBoundBytes_size = pwrErrBoundBytes_size; |
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| 297 | } |
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| 298 | |
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| 299 | void new_TightDataPointStorageF2(TightDataPointStorageF **this, |
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| 300 | size_t dataSeriesLength, size_t exactDataNum, |
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| 301 | int* type, unsigned char* exactMidBytes, size_t exactMidBytes_size, |
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| 302 | unsigned char* leadNumIntArray, //leadNumIntArray contains readable numbers.... |
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| 303 | unsigned char* resiMidBits, size_t resiMidBits_size, |
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| 304 | unsigned char* resiBitLength, size_t resiBitLengthSize, |
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| 305 | double realPrecision, float medianValue, char reqLength, unsigned int intervals, |
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| 306 | unsigned char* pwrErrBoundBytes, size_t pwrErrBoundBytes_size, unsigned char radExpo) { |
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| 307 | //int i = 0; |
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| 308 | *this = (TightDataPointStorageF *)malloc(sizeof(TightDataPointStorageF)); |
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| 309 | (*this)->allSameData = 0; |
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| 310 | (*this)->realPrecision = realPrecision; |
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| 311 | (*this)->medianValue = medianValue; |
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| 312 | (*this)->reqLength = reqLength; |
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| 313 | |
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| 314 | (*this)->dataSeriesLength = dataSeriesLength; |
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| 315 | (*this)->exactDataNum = exactDataNum; |
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| 316 | |
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| 317 | (*this)->rtypeArray = NULL; |
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| 318 | (*this)->rtypeArray_size = 0; |
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| 319 | |
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| 320 | int stateNum = 2*intervals; |
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| 321 | HuffmanTree* huffmanTree = createHuffmanTree(stateNum); |
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| 322 | encode_withTree(huffmanTree, type, dataSeriesLength, &(*this)->typeArray, &(*this)->typeArray_size); |
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| 323 | SZ_ReleaseHuffman(huffmanTree); |
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| 324 | |
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| 325 | (*this)->exactMidBytes = exactMidBytes; |
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| 326 | (*this)->exactMidBytes_size = exactMidBytes_size; |
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| 327 | |
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| 328 | (*this)->leadNumArray_size = convertIntArray2ByteArray_fast_2b(leadNumIntArray, exactDataNum, &((*this)->leadNumArray)); |
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| 329 | |
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| 330 | //(*this)->residualMidBits = resiMidBits; |
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| 331 | //(*this)->residualMidBits_size = resiMidBits_size; |
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| 332 | |
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| 333 | (*this)->residualMidBits_size = convertIntArray2ByteArray_fast_dynamic2(resiMidBits, resiBitLength, resiBitLengthSize, &((*this)->residualMidBits)); |
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| 334 | |
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| 335 | (*this)->intervals = intervals; |
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| 336 | |
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| 337 | (*this)->isLossless = 0; |
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| 338 | |
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| 339 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 340 | (*this)->pwrErrBoundBytes = pwrErrBoundBytes; |
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| 341 | else |
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| 342 | (*this)->pwrErrBoundBytes = NULL; |
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| 343 | |
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| 344 | (*this)->radExpo = radExpo; |
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| 345 | |
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| 346 | (*this)->pwrErrBoundBytes_size = pwrErrBoundBytes_size; |
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| 347 | } |
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| 348 | |
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| 349 | void convertTDPStoBytes_float(TightDataPointStorageF* tdps, unsigned char* bytes, unsigned char* dsLengthBytes, unsigned char sameByte) |
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| 350 | { |
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| 351 | size_t i, k = 0; |
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| 352 | unsigned char intervalsBytes[4]; |
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| 353 | unsigned char typeArrayLengthBytes[8]; |
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| 354 | unsigned char exactLengthBytes[8]; |
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| 355 | unsigned char exactMidBytesLength[8]; |
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| 356 | unsigned char realPrecisionBytes[8]; |
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| 357 | |
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| 358 | unsigned char medianValueBytes[4]; |
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| 359 | |
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| 360 | unsigned char segment_sizeBytes[8]; |
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| 361 | unsigned char pwrErrBoundBytes_sizeBytes[4]; |
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| 362 | unsigned char max_quant_intervals_Bytes[4]; |
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| 363 | |
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| 364 | |
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| 365 | for(i = 0;i<3;i++)//3 bytes |
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| 366 | bytes[k++] = versionNumber[i]; |
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| 367 | bytes[k++] = sameByte; //1 byte |
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| 368 | |
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| 369 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
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| 370 | k = k + MetaDataByteLength; |
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| 371 | |
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| 372 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST: 4 or 8 bytes |
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| 373 | bytes[k++] = dsLengthBytes[i]; |
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| 374 | intToBytes_bigEndian(max_quant_intervals_Bytes, confparams_cpr->max_quant_intervals); |
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| 375 | for(i = 0;i<4;i++)//4 |
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| 376 | bytes[k++] = max_quant_intervals_Bytes[i]; |
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| 377 | |
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| 378 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 379 | { |
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| 380 | bytes[k++] = tdps->radExpo; //1 byte |
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| 381 | |
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| 382 | sizeToBytes(segment_sizeBytes, confparams_cpr->segment_size); |
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| 383 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
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| 384 | bytes[k++] = segment_sizeBytes[i]; |
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| 385 | |
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| 386 | intToBytes_bigEndian(pwrErrBoundBytes_sizeBytes, tdps->pwrErrBoundBytes_size); |
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| 387 | for(i = 0;i<4;i++)//4 |
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| 388 | bytes[k++] = pwrErrBoundBytes_sizeBytes[i]; |
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| 389 | } |
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| 390 | |
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| 391 | intToBytes_bigEndian(intervalsBytes, tdps->intervals); |
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| 392 | for(i = 0;i<4;i++)//4 |
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| 393 | bytes[k++] = intervalsBytes[i]; |
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| 394 | |
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| 395 | floatToBytes(medianValueBytes, tdps->medianValue); |
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| 396 | for (i = 0; i < 4; i++)// 4 |
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| 397 | bytes[k++] = medianValueBytes[i]; |
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| 398 | |
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| 399 | bytes[k++] = tdps->reqLength; //1 byte |
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| 400 | |
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| 401 | /* if(errorBoundMode>=PW_REL) |
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| 402 | doubleToBytes(realPrecisionBytes, pw_relBoundRatio); |
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| 403 | else*/ |
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| 404 | doubleToBytes(realPrecisionBytes, tdps->realPrecision); |
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| 405 | |
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| 406 | for (i = 0; i < 8; i++)// 8 |
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| 407 | bytes[k++] = realPrecisionBytes[i]; |
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| 408 | |
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| 409 | sizeToBytes(typeArrayLengthBytes, tdps->typeArray_size); |
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| 410 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
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| 411 | bytes[k++] = typeArrayLengthBytes[i]; |
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| 412 | |
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| 413 | sizeToBytes(exactLengthBytes, tdps->exactDataNum); |
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| 414 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
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| 415 | bytes[k++] = exactLengthBytes[i]; |
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| 416 | |
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| 417 | sizeToBytes(exactMidBytesLength, tdps->exactMidBytes_size); |
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| 418 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
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| 419 | bytes[k++] = exactMidBytesLength[i]; |
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| 420 | |
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| 421 | memcpy(&(bytes[k]), tdps->typeArray, tdps->typeArray_size); |
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| 422 | k += tdps->typeArray_size; |
---|
| 423 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 424 | { |
---|
| 425 | memcpy(&(bytes[k]), tdps->pwrErrBoundBytes, tdps->pwrErrBoundBytes_size); |
---|
| 426 | k += tdps->pwrErrBoundBytes_size; |
---|
| 427 | } |
---|
| 428 | |
---|
| 429 | memcpy(&(bytes[k]), tdps->leadNumArray, tdps->leadNumArray_size); |
---|
| 430 | k += tdps->leadNumArray_size; |
---|
| 431 | memcpy(&(bytes[k]), tdps->exactMidBytes, tdps->exactMidBytes_size); |
---|
| 432 | k += tdps->exactMidBytes_size; |
---|
| 433 | |
---|
| 434 | if(tdps->residualMidBits!=NULL) |
---|
| 435 | { |
---|
| 436 | memcpy(&(bytes[k]), tdps->residualMidBits, tdps->residualMidBits_size); |
---|
| 437 | k += tdps->residualMidBits_size; |
---|
| 438 | } |
---|
| 439 | } |
---|
| 440 | |
---|
| 441 | void convertTDPStoBytes_float_reserve(TightDataPointStorageF* tdps, unsigned char* bytes, unsigned char* dsLengthBytes, unsigned char sameByte) |
---|
| 442 | { |
---|
| 443 | size_t i, k = 0; |
---|
| 444 | unsigned char intervalsBytes[4]; |
---|
| 445 | unsigned char typeArrayLengthBytes[8]; |
---|
| 446 | unsigned char rTypeLengthBytes[8]; |
---|
| 447 | unsigned char exactLengthBytes[8]; |
---|
| 448 | unsigned char exactMidBytesLength[8]; |
---|
| 449 | unsigned char realPrecisionBytes[8]; |
---|
| 450 | unsigned char reservedValueBytes[4]; |
---|
| 451 | |
---|
| 452 | unsigned char medianValueBytes[4]; |
---|
| 453 | |
---|
| 454 | unsigned char segment_sizeBytes[8]; |
---|
| 455 | unsigned char pwrErrBoundBytes_sizeBytes[4]; |
---|
| 456 | unsigned char max_quant_intervals_Bytes[4]; |
---|
| 457 | |
---|
| 458 | for(i = 0;i<3;i++)//3 |
---|
| 459 | bytes[k++] = versionNumber[i]; |
---|
| 460 | bytes[k++] = sameByte; //1 |
---|
| 461 | |
---|
| 462 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
---|
| 463 | k = k + MetaDataByteLength; |
---|
| 464 | |
---|
| 465 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 466 | bytes[k++] = dsLengthBytes[i]; |
---|
| 467 | |
---|
| 468 | |
---|
| 469 | intToBytes_bigEndian(max_quant_intervals_Bytes, confparams_cpr->max_quant_intervals); |
---|
| 470 | for(i = 0;i<4;i++)//4 |
---|
| 471 | bytes[k++] = max_quant_intervals_Bytes[i]; |
---|
| 472 | |
---|
| 473 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 474 | { |
---|
| 475 | bytes[k++] = tdps->radExpo; //1 byte |
---|
| 476 | |
---|
| 477 | sizeToBytes(segment_sizeBytes, confparams_cpr->segment_size); |
---|
| 478 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 479 | bytes[k++] = segment_sizeBytes[i]; |
---|
| 480 | |
---|
| 481 | intToBytes_bigEndian(pwrErrBoundBytes_sizeBytes, tdps->pwrErrBoundBytes_size); |
---|
| 482 | for(i = 0;i<4;i++)//4 |
---|
| 483 | bytes[k++] = pwrErrBoundBytes_sizeBytes[i]; |
---|
| 484 | } |
---|
| 485 | |
---|
| 486 | intToBytes_bigEndian(intervalsBytes, tdps->intervals); |
---|
| 487 | for(i = 0;i<4;i++)//4 |
---|
| 488 | bytes[k++] = intervalsBytes[i]; |
---|
| 489 | |
---|
| 490 | floatToBytes(medianValueBytes, tdps->medianValue); |
---|
| 491 | for (i = 0; i < 4; i++)// 4 |
---|
| 492 | bytes[k++] = medianValueBytes[i]; |
---|
| 493 | |
---|
| 494 | bytes[k++] = tdps->reqLength; //1 byte |
---|
| 495 | |
---|
| 496 | floatToBytes(realPrecisionBytes, tdps->realPrecision); |
---|
| 497 | for (i = 0; i < 8; i++)// 8 |
---|
| 498 | bytes[k++] = realPrecisionBytes[i]; |
---|
| 499 | |
---|
| 500 | sizeToBytes(typeArrayLengthBytes, tdps->typeArray_size); |
---|
| 501 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 502 | bytes[k++] = typeArrayLengthBytes[i]; |
---|
| 503 | |
---|
| 504 | sizeToBytes(rTypeLengthBytes, tdps->rtypeArray_size); |
---|
| 505 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 506 | bytes[k++] = rTypeLengthBytes[i]; |
---|
| 507 | |
---|
| 508 | sizeToBytes(exactLengthBytes, tdps->exactDataNum); |
---|
| 509 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 510 | bytes[k++] = exactLengthBytes[i]; |
---|
| 511 | |
---|
| 512 | sizeToBytes(exactMidBytesLength, tdps->exactMidBytes_size); |
---|
| 513 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 514 | bytes[k++] = exactMidBytesLength[i]; |
---|
| 515 | |
---|
| 516 | floatToBytes(reservedValueBytes, tdps->reservedValue); |
---|
| 517 | for (i = 0; i < 4; i++)// 4 |
---|
| 518 | bytes[k++] = reservedValueBytes[i]; |
---|
| 519 | |
---|
| 520 | memcpy(&(bytes[k]), tdps->rtypeArray, tdps->rtypeArray_size); |
---|
| 521 | k += tdps->rtypeArray_size; |
---|
| 522 | memcpy(&(bytes[k]), tdps->typeArray, tdps->typeArray_size); |
---|
| 523 | k += tdps->typeArray_size; |
---|
| 524 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 525 | { |
---|
| 526 | memcpy(&(bytes[k]), tdps->pwrErrBoundBytes, tdps->pwrErrBoundBytes_size); |
---|
| 527 | k += tdps->pwrErrBoundBytes_size; |
---|
| 528 | } |
---|
| 529 | memcpy(&(bytes[k]), tdps->leadNumArray, tdps->leadNumArray_size); |
---|
| 530 | k += tdps->leadNumArray_size; |
---|
| 531 | memcpy(&(bytes[k]), tdps->exactMidBytes, tdps->exactMidBytes_size); |
---|
| 532 | k += tdps->exactMidBytes_size; |
---|
| 533 | if(tdps->residualMidBits!=NULL) |
---|
| 534 | { |
---|
| 535 | memcpy(&(bytes[k]), tdps->residualMidBits, tdps->residualMidBits_size); |
---|
| 536 | k += tdps->residualMidBits_size; |
---|
| 537 | } |
---|
| 538 | } |
---|
| 539 | |
---|
| 540 | //convert TightDataPointStorageD to bytes... |
---|
| 541 | void convertTDPStoFlatBytes_float(TightDataPointStorageF *tdps, unsigned char** bytes, size_t *size) |
---|
| 542 | { |
---|
| 543 | size_t i, k = 0; |
---|
| 544 | unsigned char dsLengthBytes[8]; |
---|
| 545 | |
---|
| 546 | if(exe_params->SZ_SIZE_TYPE==4) |
---|
| 547 | intToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//4 |
---|
| 548 | else |
---|
| 549 | longToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//8 |
---|
| 550 | |
---|
| 551 | unsigned char sameByte = tdps->allSameData==1?(unsigned char)1:(unsigned char)0; |
---|
| 552 | sameByte = sameByte | (confparams_cpr->szMode << 1); |
---|
| 553 | if(tdps->isLossless) |
---|
| 554 | sameByte = (unsigned char) (sameByte | 0x10); |
---|
| 555 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 556 | sameByte = (unsigned char) (sameByte | 0x20); // 00100000, the 5th bit |
---|
| 557 | if(exe_params->SZ_SIZE_TYPE==8) |
---|
| 558 | sameByte = (unsigned char) (sameByte | 0x40); // 01000000, the 6th bit |
---|
| 559 | |
---|
| 560 | if(tdps->allSameData==1) |
---|
| 561 | { |
---|
| 562 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + tdps->exactMidBytes_size; |
---|
| 563 | *bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 564 | |
---|
| 565 | for (i = 0; i < 3; i++)//3 |
---|
| 566 | (*bytes)[k++] = versionNumber[i]; |
---|
| 567 | (*bytes)[k++] = sameByte; |
---|
| 568 | |
---|
| 569 | convertSZParamsToBytes(confparams_cpr, &((*bytes)[k])); |
---|
| 570 | k = k + MetaDataByteLength; |
---|
| 571 | |
---|
| 572 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
---|
| 573 | (*bytes)[k++] = dsLengthBytes[i]; |
---|
| 574 | |
---|
| 575 | for (i = 0; i < tdps->exactMidBytes_size; i++) |
---|
| 576 | (*bytes)[k++] = tdps->exactMidBytes[i]; |
---|
| 577 | |
---|
| 578 | *size = totalByteLength; |
---|
| 579 | } |
---|
| 580 | else if (tdps->rtypeArray == NULL) |
---|
| 581 | { |
---|
| 582 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 583 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 584 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 585 | { |
---|
| 586 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 587 | radExpoL = 1; |
---|
| 588 | pwrBoundArrayL = 4; |
---|
| 589 | } |
---|
| 590 | |
---|
| 591 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 592 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE |
---|
| 593 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 594 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 595 | |
---|
| 596 | *bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 597 | |
---|
| 598 | convertTDPStoBytes_float(tdps, *bytes, dsLengthBytes, sameByte); |
---|
| 599 | |
---|
| 600 | *size = totalByteLength; |
---|
| 601 | } |
---|
| 602 | else //the case with reserved value |
---|
| 603 | { |
---|
| 604 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 605 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 606 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 607 | { |
---|
| 608 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 609 | radExpoL = 1; |
---|
| 610 | pwrBoundArrayL = 4; |
---|
| 611 | } |
---|
| 612 | |
---|
| 613 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 614 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + 4 + tdps->rtypeArray_size |
---|
| 615 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 616 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 617 | |
---|
| 618 | sameByte = (unsigned char) (sameByte | 0x08); // 00001000, the 4th bit |
---|
| 619 | // denotes whether it is |
---|
| 620 | // with "reserved value" |
---|
| 621 | |
---|
| 622 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 623 | sameByte = (unsigned char) (sameByte | 0x10); // 00001000, the 5th bit |
---|
| 624 | |
---|
| 625 | *bytes = (unsigned char*)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 626 | |
---|
| 627 | convertTDPStoBytes_float_reserve(tdps, *bytes, dsLengthBytes, sameByte); |
---|
| 628 | |
---|
| 629 | *size = totalByteLength; |
---|
| 630 | } |
---|
| 631 | } |
---|
| 632 | |
---|
| 633 | void convertTDPStoFlatBytes_float_args(TightDataPointStorageF *tdps, unsigned char* bytes, size_t *size) |
---|
| 634 | { |
---|
| 635 | size_t i, k = 0; |
---|
| 636 | unsigned char dsLengthBytes[8]; |
---|
| 637 | |
---|
| 638 | if(exe_params->SZ_SIZE_TYPE==4) |
---|
| 639 | intToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//4 |
---|
| 640 | else |
---|
| 641 | longToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//8 |
---|
| 642 | |
---|
| 643 | unsigned char sameByte = tdps->allSameData==1?(unsigned char)1:(unsigned char)0; |
---|
| 644 | sameByte = sameByte | (confparams_cpr->szMode << 1); |
---|
| 645 | if(tdps->isLossless) |
---|
| 646 | sameByte = (unsigned char) (sameByte | 0x10); |
---|
| 647 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 648 | sameByte = (unsigned char) (sameByte | 0x20); // 00100000, the 5th bit |
---|
| 649 | if(exe_params->SZ_SIZE_TYPE==8) |
---|
| 650 | sameByte = (unsigned char) (sameByte | 0x40); // 01000000, the 6th bit |
---|
| 651 | |
---|
| 652 | if(tdps->allSameData==1) |
---|
| 653 | { |
---|
| 654 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + tdps->exactMidBytes_size; |
---|
| 655 | //*bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 656 | |
---|
| 657 | for (i = 0; i < 3; i++)//3 |
---|
| 658 | bytes[k++] = versionNumber[i]; |
---|
| 659 | bytes[k++] = sameByte; |
---|
| 660 | |
---|
| 661 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
---|
| 662 | k = k + MetaDataByteLength; |
---|
| 663 | |
---|
| 664 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
---|
| 665 | bytes[k++] = dsLengthBytes[i]; |
---|
| 666 | for (i = 0; i < tdps->exactMidBytes_size; i++) |
---|
| 667 | bytes[k++] = tdps->exactMidBytes[i]; |
---|
| 668 | |
---|
| 669 | *size = totalByteLength; |
---|
| 670 | } |
---|
| 671 | else if (tdps->rtypeArray == NULL) |
---|
| 672 | { |
---|
| 673 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 674 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 675 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 676 | { |
---|
| 677 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 678 | radExpoL = 1; |
---|
| 679 | pwrBoundArrayL = 4; |
---|
| 680 | } |
---|
| 681 | |
---|
| 682 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 683 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE |
---|
| 684 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 685 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 686 | |
---|
| 687 | convertTDPStoBytes_float(tdps, bytes, dsLengthBytes, sameByte); |
---|
| 688 | |
---|
| 689 | *size = totalByteLength; |
---|
| 690 | } |
---|
| 691 | else //the case with reserved value |
---|
| 692 | { |
---|
| 693 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 694 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 695 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 696 | { |
---|
| 697 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 698 | radExpoL = 1; |
---|
| 699 | pwrBoundArrayL = 4; |
---|
| 700 | } |
---|
| 701 | |
---|
| 702 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 703 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + 4 + tdps->rtypeArray_size |
---|
| 704 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 705 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 706 | |
---|
| 707 | sameByte = (unsigned char) (sameByte | 0x08); // 00001000, the 4th bit |
---|
| 708 | // denotes whether it is |
---|
| 709 | // with "reserved value" |
---|
| 710 | |
---|
| 711 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 712 | sameByte = (unsigned char) (sameByte | 0x10); // 00001000, the 5th bit |
---|
| 713 | |
---|
| 714 | convertTDPStoBytes_float_reserve(tdps, bytes, dsLengthBytes, sameByte); |
---|
| 715 | |
---|
| 716 | *size = totalByteLength; |
---|
| 717 | } |
---|
| 718 | } |
---|
| 719 | |
---|
| 720 | /** |
---|
| 721 | * to free the memory used in the compression |
---|
| 722 | * */ |
---|
| 723 | void free_TightDataPointStorageF(TightDataPointStorageF *tdps) |
---|
| 724 | { |
---|
| 725 | if(tdps->rtypeArray!=NULL) |
---|
| 726 | free(tdps->rtypeArray); |
---|
| 727 | if(tdps->typeArray!=NULL) |
---|
| 728 | free(tdps->typeArray); |
---|
| 729 | if(tdps->leadNumArray!=NULL) |
---|
| 730 | free(tdps->leadNumArray); |
---|
| 731 | if(tdps->exactMidBytes!=NULL) |
---|
| 732 | free(tdps->exactMidBytes); |
---|
| 733 | if(tdps->residualMidBits!=NULL) |
---|
| 734 | free(tdps->residualMidBits); |
---|
| 735 | if(tdps->pwrErrBoundBytes!=NULL) |
---|
| 736 | free(tdps->pwrErrBoundBytes); |
---|
| 737 | free(tdps); |
---|
| 738 | } |
---|
| 739 | |
---|
| 740 | /** |
---|
| 741 | * to free the memory used in the decompression |
---|
| 742 | * */ |
---|
| 743 | void free_TightDataPointStorageF2(TightDataPointStorageF *tdps) |
---|
| 744 | { |
---|
| 745 | free(tdps); |
---|
| 746 | } |
---|