[2c47b73] | 1 | /** |
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| 2 | * @file TightPointDataStorageF.c |
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| 3 | * @author Sheng Di and Dingwen Tao |
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| 4 | * @date Aug, 2016 |
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| 5 | * @brief The functions used to construct the tightPointDataStorage element for storing compressed bytes. |
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| 6 | * (C) 2016 by Mathematics and Computer Science (MCS), Argonne National Laboratory. |
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| 7 | * See COPYRIGHT in top-level directory. |
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| 8 | */ |
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| 9 | |
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| 10 | #include <stdlib.h> |
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| 11 | #include <stdio.h> |
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| 12 | #include <string.h> |
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| 13 | #include "TightDataPointStorageF.h" |
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| 14 | #include "sz.h" |
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| 15 | #include "Huffman.h" |
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| 16 | //#include "rw.h" |
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| 17 | |
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| 18 | void new_TightDataPointStorageF_Empty(TightDataPointStorageF **this) |
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| 19 | { |
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| 20 | *this = (TightDataPointStorageF*)malloc(sizeof(TightDataPointStorageF)); |
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| 21 | (*this)->dataSeriesLength = 0; |
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| 22 | (*this)->allSameData = 0; |
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| 23 | (*this)->exactDataNum = 0; |
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| 24 | (*this)->reservedValue = 0; |
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| 25 | (*this)->reqLength = 0; |
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| 26 | (*this)->radExpo = 0; |
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| 27 | |
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| 28 | (*this)->rtypeArray = NULL; |
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| 29 | (*this)->rtypeArray_size = 0; |
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| 30 | |
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| 31 | (*this)->typeArray = NULL; //its size is dataSeriesLength/4 (or xxx/4+1) |
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| 32 | (*this)->typeArray_size = 0; |
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| 33 | |
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| 34 | (*this)->leadNumArray = NULL; //its size is exactDataNum/4 (or exactDataNum/4+1) |
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| 35 | (*this)->leadNumArray_size = 0; |
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| 36 | |
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| 37 | (*this)->exactMidBytes = NULL; |
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| 38 | (*this)->exactMidBytes_size = 0; |
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| 39 | |
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| 40 | (*this)->residualMidBits = NULL; |
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| 41 | (*this)->residualMidBits_size = 0; |
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| 42 | |
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| 43 | (*this)->intervals = 0; |
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| 44 | (*this)->isLossless = 0; |
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| 45 | |
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| 46 | (*this)->segment_size = 0; |
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| 47 | (*this)->pwrErrBoundBytes = NULL; |
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| 48 | (*this)->pwrErrBoundBytes_size = 0; |
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[9ee2ce3] | 49 | |
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| 50 | (*this)->raBytes = NULL; |
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| 51 | (*this)->raBytes_size = 0; |
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[2c47b73] | 52 | } |
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| 53 | |
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| 54 | int new_TightDataPointStorageF_fromFlatBytes(TightDataPointStorageF **this, unsigned char* flatBytes, size_t flatBytesLength) |
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| 55 | { |
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| 56 | new_TightDataPointStorageF_Empty(this); |
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| 57 | size_t i, index = 0; |
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| 58 | size_t pwrErrBoundBytes_size = 0, segmentL = 0, radExpoL = 0, pwrErrBoundBytesL = 0; |
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| 59 | char version[3]; |
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| 60 | for (i = 0; i < 3; i++) |
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| 61 | version[i] = flatBytes[index++]; //3 |
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| 62 | unsigned char sameRByte = flatBytes[index++]; //1 |
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| 63 | if(checkVersion(version)!=1) |
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| 64 | { |
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| 65 | //wrong version |
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| 66 | printf("Wrong version: \nCompressed-data version (%d.%d.%d)\n",version[0], version[1], version[2]); |
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| 67 | printf("Current sz version: (%d.%d.%d)\n", versionNumber[0], versionNumber[1], versionNumber[2]); |
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| 68 | printf("Please double-check if the compressed data (or file) is correct.\n"); |
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| 69 | exit(0); |
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| 70 | } |
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| 71 | int same = sameRByte & 0x01; |
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| 72 | //confparams_dec->szMode = (sameRByte & 0x06)>>1; |
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| 73 | (*this)->isLossless = (sameRByte & 0x10)>>4; |
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| 74 | int isPW_REL = (sameRByte & 0x20)>>5; |
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| 75 | exe_params->SZ_SIZE_TYPE = ((sameRByte & 0x40)>>6)==1?8:4; |
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| 76 | int errorBoundMode = ABS; |
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| 77 | if(isPW_REL) |
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| 78 | { |
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| 79 | errorBoundMode = PW_REL; |
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| 80 | segmentL = exe_params->SZ_SIZE_TYPE; |
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| 81 | pwrErrBoundBytesL = 4; |
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| 82 | } |
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| 83 | |
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| 84 | sz_params* params = convertBytesToSZParams(&(flatBytes[index])); |
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| 85 | int mode = confparams_dec->szMode; |
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| 86 | int predictionMode = confparams_dec->predictionMode; |
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[9ee2ce3] | 87 | int losslessCompressor = confparams_dec->losslessCompressor; |
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[2c47b73] | 88 | if(confparams_dec!=NULL) |
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| 89 | free(confparams_dec); |
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| 90 | confparams_dec = params; |
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| 91 | confparams_dec->szMode = mode; |
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[9ee2ce3] | 92 | confparams_dec->losslessCompressor = losslessCompressor; |
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| 93 | |
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[2c47b73] | 94 | if(mode==SZ_TEMPORAL_COMPRESSION) |
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| 95 | { |
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| 96 | confparams_dec->szMode = SZ_TEMPORAL_COMPRESSION; |
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| 97 | confparams_dec->predictionMode = predictionMode; |
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| 98 | } |
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| 99 | |
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| 100 | index += MetaDataByteLength; |
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[9ee2ce3] | 101 | |
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| 102 | int isRandomAccess = (sameRByte >> 7) & 0x01; |
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[2c47b73] | 103 | |
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| 104 | unsigned char dsLengthBytes[8]; |
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| 105 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 106 | dsLengthBytes[i] = flatBytes[index++]; |
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| 107 | (*this)->dataSeriesLength = bytesToSize(dsLengthBytes);// 4 or 8 |
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| 108 | |
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| 109 | if((*this)->isLossless==1) |
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| 110 | { |
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| 111 | //(*this)->exactMidBytes = flatBytes+8; |
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| 112 | return errorBoundMode; |
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| 113 | } |
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| 114 | else if(same==1) |
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| 115 | { |
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| 116 | (*this)->allSameData = 1; |
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| 117 | size_t exactMidBytesLength = sizeof(float); //flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE; |
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| 118 | if(exactMidBytesLength>0) |
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| 119 | (*this)->exactMidBytes = (unsigned char*)malloc(sizeof(unsigned char)*exactMidBytesLength); |
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| 120 | else |
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| 121 | (*this)->exactMidBytes = NULL; |
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| 122 | for(i = 0;i<exactMidBytesLength;i++) |
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| 123 | (*this)->exactMidBytes[i] = flatBytes[index++]; |
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| 124 | return errorBoundMode; |
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| 125 | } |
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| 126 | else |
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| 127 | (*this)->allSameData = 0; |
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[9ee2ce3] | 128 | if(isRandomAccess == 1) |
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| 129 | { |
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| 130 | (*this)->raBytes_size = flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE; |
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| 131 | (*this)->raBytes = &(flatBytes[index]); |
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| 132 | return errorBoundMode; |
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| 133 | } |
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[2c47b73] | 134 | |
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| 135 | int rtype_ = sameRByte & 0x08; //=00001000 |
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| 136 | unsigned char byteBuf[8]; |
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| 137 | |
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| 138 | for (i = 0; i < 4; i++) |
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| 139 | byteBuf[i] = flatBytes[index++]; |
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| 140 | int max_quant_intervals = bytesToInt_bigEndian(byteBuf);// 4 |
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| 141 | |
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| 142 | confparams_dec->maxRangeRadius = max_quant_intervals/2; |
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| 143 | |
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| 144 | if(errorBoundMode>=PW_REL) |
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| 145 | { |
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| 146 | (*this)->radExpo = flatBytes[index++];//1 |
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| 147 | radExpoL = 1; |
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| 148 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 149 | byteBuf[i] = flatBytes[index++]; |
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| 150 | params->segment_size = (*this)->segment_size = bytesToSize(byteBuf);// exe_params->SZ_SIZE_TYPE |
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| 151 | |
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| 152 | for (i = 0; i < 4; i++) |
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| 153 | byteBuf[i] = flatBytes[index++]; |
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| 154 | pwrErrBoundBytes_size = (*this)->pwrErrBoundBytes_size = bytesToInt_bigEndian(byteBuf);// 4 |
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| 155 | } |
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| 156 | else |
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| 157 | { |
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| 158 | pwrErrBoundBytes_size = 0; |
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| 159 | (*this)->pwrErrBoundBytes = NULL; |
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| 160 | } |
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| 161 | for (i = 0; i < 4; i++) |
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| 162 | byteBuf[i] = flatBytes[index++]; |
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| 163 | (*this)->intervals = bytesToInt_bigEndian(byteBuf);// 4 |
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| 164 | |
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| 165 | for (i = 0; i < 4; i++) |
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| 166 | byteBuf[i] = flatBytes[index++]; |
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| 167 | (*this)->medianValue = bytesToFloat(byteBuf); //4 |
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| 168 | |
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| 169 | (*this)->reqLength = flatBytes[index++]; //1 |
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| 170 | |
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| 171 | for (i = 0; i < 8; i++) |
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| 172 | byteBuf[i] = flatBytes[index++]; |
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| 173 | (*this)->realPrecision = bytesToDouble(byteBuf);//8 |
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| 174 | |
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| 175 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 176 | byteBuf[i] = flatBytes[index++]; |
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| 177 | (*this)->typeArray_size = bytesToSize(byteBuf);// 4 |
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| 178 | if(rtype_!=0) |
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| 179 | { |
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| 180 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++) |
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| 181 | byteBuf[i] = flatBytes[index++]; |
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[9ee2ce3] | 182 | (*this)->rtypeArray_size = bytesToSize(byteBuf);//(ST) |
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[2c47b73] | 183 | } |
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| 184 | else |
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| 185 | (*this)->rtypeArray_size = 0; |
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| 186 | |
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| 187 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 188 | byteBuf[i] = flatBytes[index++]; |
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| 189 | (*this)->exactDataNum = bytesToSize(byteBuf);// ST |
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| 190 | |
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| 191 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
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| 192 | byteBuf[i] = flatBytes[index++]; |
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| 193 | (*this)->exactMidBytes_size = bytesToSize(byteBuf);// ST |
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| 194 | |
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| 195 | if (rtype_ != 0) { |
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| 196 | if((*this)->rtypeArray_size>0) |
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| 197 | (*this)->rtypeArray = (unsigned char*)malloc(sizeof(unsigned char)*(*this)->rtypeArray_size); |
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| 198 | else |
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| 199 | (*this)->rtypeArray = NULL; |
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| 200 | |
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| 201 | for (i = 0; i < 4; i++) |
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| 202 | byteBuf[i] = flatBytes[index++]; |
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| 203 | (*this)->reservedValue = bytesToFloat(byteBuf);//4 |
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| 204 | } |
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| 205 | |
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| 206 | size_t logicLeadNumBitsNum = (*this)->exactDataNum * 2; |
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| 207 | if (logicLeadNumBitsNum % 8 == 0) |
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| 208 | { |
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| 209 | (*this)->leadNumArray_size = logicLeadNumBitsNum >> 3; |
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| 210 | } |
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| 211 | else |
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| 212 | { |
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| 213 | (*this)->leadNumArray_size = (logicLeadNumBitsNum >> 3) + 1; |
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| 214 | } |
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| 215 | |
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[9ee2ce3] | 216 | int minLogValueSize = 0; |
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| 217 | if(errorBoundMode>=PW_REL) |
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| 218 | minLogValueSize = 4; |
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| 219 | |
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[2c47b73] | 220 | if ((*this)->rtypeArray != NULL) |
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| 221 | { |
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| 222 | (*this)->residualMidBits_size = flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE - 4 - radExpoL - segmentL - pwrErrBoundBytesL - 4 - 4 - 1 - 8 |
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[9ee2ce3] | 223 | - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - minLogValueSize - exe_params->SZ_SIZE_TYPE - 4 - (*this)->rtypeArray_size |
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| 224 | - minLogValueSize - (*this)->typeArray_size - (*this)->leadNumArray_size |
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[2c47b73] | 225 | - (*this)->exactMidBytes_size - pwrErrBoundBytes_size; |
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| 226 | for (i = 0; i < (*this)->rtypeArray_size; i++) |
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| 227 | (*this)->rtypeArray[i] = flatBytes[index++]; |
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| 228 | } |
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| 229 | else |
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| 230 | { |
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| 231 | (*this)->residualMidBits_size = flatBytesLength - 3 - 1 - MetaDataByteLength - exe_params->SZ_SIZE_TYPE - 4 - radExpoL - segmentL - pwrErrBoundBytesL - 4 - 4 - 1 - 8 |
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[9ee2ce3] | 232 | - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - exe_params->SZ_SIZE_TYPE - minLogValueSize - (*this)->typeArray_size |
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[2c47b73] | 233 | - (*this)->leadNumArray_size - (*this)->exactMidBytes_size - pwrErrBoundBytes_size; |
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[9ee2ce3] | 234 | } |
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| 235 | |
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| 236 | if(errorBoundMode>=PW_REL) |
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| 237 | { |
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| 238 | (*this)->minLogValue = bytesToFloat(&flatBytes[index]); |
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| 239 | index+=4; |
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| 240 | } |
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[2c47b73] | 241 | |
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| 242 | (*this)->typeArray = &flatBytes[index]; |
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| 243 | //retrieve the number of states (i.e., stateNum) |
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| 244 | (*this)->allNodes = bytesToInt_bigEndian((*this)->typeArray); //the first 4 bytes store the stateNum |
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| 245 | (*this)->stateNum = ((*this)->allNodes+1)/2; |
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| 246 | |
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| 247 | index+=(*this)->typeArray_size; |
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| 248 | |
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| 249 | (*this)->pwrErrBoundBytes = &flatBytes[index]; |
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| 250 | |
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| 251 | index+=pwrErrBoundBytes_size; |
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| 252 | |
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| 253 | (*this)->leadNumArray = &flatBytes[index]; |
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| 254 | |
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| 255 | index+=(*this)->leadNumArray_size; |
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| 256 | |
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| 257 | (*this)->exactMidBytes = &flatBytes[index]; |
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| 258 | |
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| 259 | index+=(*this)->exactMidBytes_size; |
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| 260 | |
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| 261 | (*this)->residualMidBits = &flatBytes[index]; |
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| 262 | |
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| 263 | //index+=(*this)->residualMidBits_size; |
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| 264 | |
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| 265 | return errorBoundMode; |
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| 266 | } |
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| 267 | |
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| 268 | /** |
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| 269 | * |
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| 270 | * type's length == dataSeriesLength |
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| 271 | * exactMidBytes's length == exactMidBytes_size |
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| 272 | * leadNumIntArray's length == exactDataNum |
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| 273 | * escBytes's length == escBytes_size |
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| 274 | * resiBitLength's length == resiBitLengthSize |
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| 275 | * */ |
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| 276 | void new_TightDataPointStorageF(TightDataPointStorageF **this, |
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| 277 | size_t dataSeriesLength, size_t exactDataNum, |
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| 278 | int* type, unsigned char* exactMidBytes, size_t exactMidBytes_size, |
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| 279 | unsigned char* leadNumIntArray, //leadNumIntArray contains readable numbers.... |
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| 280 | unsigned char* resiMidBits, size_t resiMidBits_size, |
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| 281 | unsigned char resiBitLength, |
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| 282 | double realPrecision, float medianValue, char reqLength, unsigned int intervals, |
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| 283 | unsigned char* pwrErrBoundBytes, size_t pwrErrBoundBytes_size, unsigned char radExpo) { |
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| 284 | |
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| 285 | *this = (TightDataPointStorageF *)malloc(sizeof(TightDataPointStorageF)); |
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| 286 | (*this)->allSameData = 0; |
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| 287 | (*this)->realPrecision = realPrecision; |
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| 288 | (*this)->medianValue = medianValue; |
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| 289 | (*this)->reqLength = reqLength; |
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| 290 | |
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| 291 | (*this)->dataSeriesLength = dataSeriesLength; |
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| 292 | (*this)->exactDataNum = exactDataNum; |
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| 293 | |
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| 294 | (*this)->rtypeArray = NULL; |
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| 295 | (*this)->rtypeArray_size = 0; |
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| 296 | |
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| 297 | int stateNum = 2*intervals; |
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| 298 | HuffmanTree* huffmanTree = createHuffmanTree(stateNum); |
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| 299 | encode_withTree(huffmanTree, type, dataSeriesLength, &(*this)->typeArray, &(*this)->typeArray_size); |
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| 300 | SZ_ReleaseHuffman(huffmanTree); |
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| 301 | |
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| 302 | (*this)->exactMidBytes = exactMidBytes; |
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| 303 | (*this)->exactMidBytes_size = exactMidBytes_size; |
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| 304 | |
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| 305 | (*this)->leadNumArray_size = convertIntArray2ByteArray_fast_2b(leadNumIntArray, exactDataNum, &((*this)->leadNumArray)); |
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| 306 | |
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| 307 | (*this)->residualMidBits_size = convertIntArray2ByteArray_fast_dynamic(resiMidBits, resiBitLength, exactDataNum, &((*this)->residualMidBits)); |
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| 308 | |
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| 309 | (*this)->intervals = intervals; |
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| 310 | |
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| 311 | (*this)->isLossless = 0; |
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| 312 | |
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| 313 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 314 | (*this)->pwrErrBoundBytes = pwrErrBoundBytes; |
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| 315 | else |
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| 316 | (*this)->pwrErrBoundBytes = NULL; |
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| 317 | |
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| 318 | (*this)->radExpo = radExpo; |
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| 319 | |
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| 320 | (*this)->pwrErrBoundBytes_size = pwrErrBoundBytes_size; |
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| 321 | } |
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| 322 | |
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| 323 | void new_TightDataPointStorageF2(TightDataPointStorageF **this, |
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| 324 | size_t dataSeriesLength, size_t exactDataNum, |
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| 325 | int* type, unsigned char* exactMidBytes, size_t exactMidBytes_size, |
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| 326 | unsigned char* leadNumIntArray, //leadNumIntArray contains readable numbers.... |
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| 327 | unsigned char* resiMidBits, size_t resiMidBits_size, |
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| 328 | unsigned char* resiBitLength, size_t resiBitLengthSize, |
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| 329 | double realPrecision, float medianValue, char reqLength, unsigned int intervals, |
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| 330 | unsigned char* pwrErrBoundBytes, size_t pwrErrBoundBytes_size, unsigned char radExpo) { |
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| 331 | //int i = 0; |
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| 332 | *this = (TightDataPointStorageF *)malloc(sizeof(TightDataPointStorageF)); |
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| 333 | (*this)->allSameData = 0; |
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| 334 | (*this)->realPrecision = realPrecision; |
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| 335 | (*this)->medianValue = medianValue; |
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| 336 | (*this)->reqLength = reqLength; |
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| 337 | |
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| 338 | (*this)->dataSeriesLength = dataSeriesLength; |
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| 339 | (*this)->exactDataNum = exactDataNum; |
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| 340 | |
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| 341 | (*this)->rtypeArray = NULL; |
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| 342 | (*this)->rtypeArray_size = 0; |
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| 343 | |
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| 344 | int stateNum = 2*intervals; |
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| 345 | HuffmanTree* huffmanTree = createHuffmanTree(stateNum); |
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| 346 | encode_withTree(huffmanTree, type, dataSeriesLength, &(*this)->typeArray, &(*this)->typeArray_size); |
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| 347 | SZ_ReleaseHuffman(huffmanTree); |
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| 348 | |
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| 349 | (*this)->exactMidBytes = exactMidBytes; |
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| 350 | (*this)->exactMidBytes_size = exactMidBytes_size; |
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| 351 | |
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| 352 | (*this)->leadNumArray_size = convertIntArray2ByteArray_fast_2b(leadNumIntArray, exactDataNum, &((*this)->leadNumArray)); |
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| 353 | |
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| 354 | //(*this)->residualMidBits = resiMidBits; |
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| 355 | //(*this)->residualMidBits_size = resiMidBits_size; |
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| 356 | |
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| 357 | (*this)->residualMidBits_size = convertIntArray2ByteArray_fast_dynamic2(resiMidBits, resiBitLength, resiBitLengthSize, &((*this)->residualMidBits)); |
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| 358 | |
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| 359 | (*this)->intervals = intervals; |
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| 360 | |
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| 361 | (*this)->isLossless = 0; |
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| 362 | |
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| 363 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 364 | (*this)->pwrErrBoundBytes = pwrErrBoundBytes; |
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| 365 | else |
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| 366 | (*this)->pwrErrBoundBytes = NULL; |
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| 367 | |
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| 368 | (*this)->radExpo = radExpo; |
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| 369 | |
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| 370 | (*this)->pwrErrBoundBytes_size = pwrErrBoundBytes_size; |
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| 371 | } |
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| 372 | |
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| 373 | void convertTDPStoBytes_float(TightDataPointStorageF* tdps, unsigned char* bytes, unsigned char* dsLengthBytes, unsigned char sameByte) |
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| 374 | { |
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| 375 | size_t i, k = 0; |
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| 376 | unsigned char intervalsBytes[4]; |
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| 377 | unsigned char typeArrayLengthBytes[8]; |
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| 378 | unsigned char exactLengthBytes[8]; |
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| 379 | unsigned char exactMidBytesLength[8]; |
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| 380 | unsigned char realPrecisionBytes[8]; |
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| 381 | |
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| 382 | unsigned char medianValueBytes[4]; |
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| 383 | |
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| 384 | unsigned char segment_sizeBytes[8]; |
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| 385 | unsigned char pwrErrBoundBytes_sizeBytes[4]; |
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| 386 | unsigned char max_quant_intervals_Bytes[4]; |
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| 387 | |
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| 388 | |
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| 389 | for(i = 0;i<3;i++)//3 bytes |
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| 390 | bytes[k++] = versionNumber[i]; |
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| 391 | bytes[k++] = sameByte; //1 byte |
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| 392 | |
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| 393 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
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| 394 | k = k + MetaDataByteLength; |
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| 395 | |
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| 396 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST: 4 or 8 bytes |
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| 397 | bytes[k++] = dsLengthBytes[i]; |
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| 398 | intToBytes_bigEndian(max_quant_intervals_Bytes, confparams_cpr->max_quant_intervals); |
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| 399 | for(i = 0;i<4;i++)//4 |
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| 400 | bytes[k++] = max_quant_intervals_Bytes[i]; |
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| 401 | |
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| 402 | if(confparams_cpr->errorBoundMode>=PW_REL) |
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| 403 | { |
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| 404 | bytes[k++] = tdps->radExpo; //1 byte |
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| 405 | |
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| 406 | sizeToBytes(segment_sizeBytes, confparams_cpr->segment_size); |
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| 407 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
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| 408 | bytes[k++] = segment_sizeBytes[i]; |
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| 409 | |
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| 410 | intToBytes_bigEndian(pwrErrBoundBytes_sizeBytes, tdps->pwrErrBoundBytes_size); |
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| 411 | for(i = 0;i<4;i++)//4 |
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| 412 | bytes[k++] = pwrErrBoundBytes_sizeBytes[i]; |
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| 413 | } |
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| 414 | |
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| 415 | intToBytes_bigEndian(intervalsBytes, tdps->intervals); |
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| 416 | for(i = 0;i<4;i++)//4 |
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| 417 | bytes[k++] = intervalsBytes[i]; |
---|
| 418 | |
---|
| 419 | floatToBytes(medianValueBytes, tdps->medianValue); |
---|
| 420 | for (i = 0; i < 4; i++)// 4 |
---|
| 421 | bytes[k++] = medianValueBytes[i]; |
---|
| 422 | |
---|
| 423 | bytes[k++] = tdps->reqLength; //1 byte |
---|
| 424 | |
---|
| 425 | /* if(errorBoundMode>=PW_REL) |
---|
| 426 | doubleToBytes(realPrecisionBytes, pw_relBoundRatio); |
---|
| 427 | else*/ |
---|
| 428 | doubleToBytes(realPrecisionBytes, tdps->realPrecision); |
---|
| 429 | |
---|
| 430 | for (i = 0; i < 8; i++)// 8 |
---|
| 431 | bytes[k++] = realPrecisionBytes[i]; |
---|
| 432 | |
---|
| 433 | sizeToBytes(typeArrayLengthBytes, tdps->typeArray_size); |
---|
| 434 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 435 | bytes[k++] = typeArrayLengthBytes[i]; |
---|
| 436 | |
---|
| 437 | sizeToBytes(exactLengthBytes, tdps->exactDataNum); |
---|
| 438 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 439 | bytes[k++] = exactLengthBytes[i]; |
---|
| 440 | |
---|
| 441 | sizeToBytes(exactMidBytesLength, tdps->exactMidBytes_size); |
---|
| 442 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 443 | bytes[k++] = exactMidBytesLength[i]; |
---|
| 444 | |
---|
[9ee2ce3] | 445 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 446 | { |
---|
| 447 | floatToBytes(exactMidBytesLength, tdps->minLogValue); |
---|
| 448 | for(i=0;i<4;i++) |
---|
| 449 | bytes[k++] = exactMidBytesLength[i]; |
---|
| 450 | } |
---|
| 451 | |
---|
[2c47b73] | 452 | memcpy(&(bytes[k]), tdps->typeArray, tdps->typeArray_size); |
---|
| 453 | k += tdps->typeArray_size; |
---|
| 454 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 455 | { |
---|
| 456 | memcpy(&(bytes[k]), tdps->pwrErrBoundBytes, tdps->pwrErrBoundBytes_size); |
---|
| 457 | k += tdps->pwrErrBoundBytes_size; |
---|
| 458 | } |
---|
| 459 | |
---|
| 460 | memcpy(&(bytes[k]), tdps->leadNumArray, tdps->leadNumArray_size); |
---|
| 461 | k += tdps->leadNumArray_size; |
---|
| 462 | memcpy(&(bytes[k]), tdps->exactMidBytes, tdps->exactMidBytes_size); |
---|
| 463 | k += tdps->exactMidBytes_size; |
---|
| 464 | |
---|
| 465 | if(tdps->residualMidBits!=NULL) |
---|
| 466 | { |
---|
| 467 | memcpy(&(bytes[k]), tdps->residualMidBits, tdps->residualMidBits_size); |
---|
| 468 | k += tdps->residualMidBits_size; |
---|
| 469 | } |
---|
| 470 | } |
---|
| 471 | |
---|
| 472 | void convertTDPStoBytes_float_reserve(TightDataPointStorageF* tdps, unsigned char* bytes, unsigned char* dsLengthBytes, unsigned char sameByte) |
---|
| 473 | { |
---|
| 474 | size_t i, k = 0; |
---|
| 475 | unsigned char intervalsBytes[4]; |
---|
| 476 | unsigned char typeArrayLengthBytes[8]; |
---|
| 477 | unsigned char rTypeLengthBytes[8]; |
---|
| 478 | unsigned char exactLengthBytes[8]; |
---|
| 479 | unsigned char exactMidBytesLength[8]; |
---|
| 480 | unsigned char realPrecisionBytes[8]; |
---|
| 481 | unsigned char reservedValueBytes[4]; |
---|
| 482 | |
---|
| 483 | unsigned char medianValueBytes[4]; |
---|
| 484 | |
---|
| 485 | unsigned char segment_sizeBytes[8]; |
---|
| 486 | unsigned char pwrErrBoundBytes_sizeBytes[4]; |
---|
| 487 | unsigned char max_quant_intervals_Bytes[4]; |
---|
| 488 | |
---|
| 489 | for(i = 0;i<3;i++)//3 |
---|
| 490 | bytes[k++] = versionNumber[i]; |
---|
| 491 | bytes[k++] = sameByte; //1 |
---|
| 492 | |
---|
| 493 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
---|
| 494 | k = k + MetaDataByteLength; |
---|
| 495 | |
---|
| 496 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 497 | bytes[k++] = dsLengthBytes[i]; |
---|
| 498 | |
---|
| 499 | |
---|
| 500 | intToBytes_bigEndian(max_quant_intervals_Bytes, confparams_cpr->max_quant_intervals); |
---|
| 501 | for(i = 0;i<4;i++)//4 |
---|
| 502 | bytes[k++] = max_quant_intervals_Bytes[i]; |
---|
| 503 | |
---|
| 504 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 505 | { |
---|
| 506 | bytes[k++] = tdps->radExpo; //1 byte |
---|
| 507 | |
---|
| 508 | sizeToBytes(segment_sizeBytes, confparams_cpr->segment_size); |
---|
| 509 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 510 | bytes[k++] = segment_sizeBytes[i]; |
---|
| 511 | |
---|
| 512 | intToBytes_bigEndian(pwrErrBoundBytes_sizeBytes, tdps->pwrErrBoundBytes_size); |
---|
| 513 | for(i = 0;i<4;i++)//4 |
---|
| 514 | bytes[k++] = pwrErrBoundBytes_sizeBytes[i]; |
---|
| 515 | } |
---|
| 516 | |
---|
| 517 | intToBytes_bigEndian(intervalsBytes, tdps->intervals); |
---|
| 518 | for(i = 0;i<4;i++)//4 |
---|
| 519 | bytes[k++] = intervalsBytes[i]; |
---|
| 520 | |
---|
| 521 | floatToBytes(medianValueBytes, tdps->medianValue); |
---|
| 522 | for (i = 0; i < 4; i++)// 4 |
---|
| 523 | bytes[k++] = medianValueBytes[i]; |
---|
| 524 | |
---|
| 525 | bytes[k++] = tdps->reqLength; //1 byte |
---|
| 526 | |
---|
| 527 | floatToBytes(realPrecisionBytes, tdps->realPrecision); |
---|
| 528 | for (i = 0; i < 8; i++)// 8 |
---|
| 529 | bytes[k++] = realPrecisionBytes[i]; |
---|
| 530 | |
---|
| 531 | sizeToBytes(typeArrayLengthBytes, tdps->typeArray_size); |
---|
| 532 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 533 | bytes[k++] = typeArrayLengthBytes[i]; |
---|
| 534 | |
---|
| 535 | sizeToBytes(rTypeLengthBytes, tdps->rtypeArray_size); |
---|
| 536 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 537 | bytes[k++] = rTypeLengthBytes[i]; |
---|
| 538 | |
---|
| 539 | sizeToBytes(exactLengthBytes, tdps->exactDataNum); |
---|
| 540 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 541 | bytes[k++] = exactLengthBytes[i]; |
---|
| 542 | |
---|
| 543 | sizeToBytes(exactMidBytesLength, tdps->exactMidBytes_size); |
---|
| 544 | for(i = 0;i<exe_params->SZ_SIZE_TYPE;i++)//ST |
---|
| 545 | bytes[k++] = exactMidBytesLength[i]; |
---|
| 546 | |
---|
| 547 | floatToBytes(reservedValueBytes, tdps->reservedValue); |
---|
| 548 | for (i = 0; i < 4; i++)// 4 |
---|
| 549 | bytes[k++] = reservedValueBytes[i]; |
---|
| 550 | |
---|
| 551 | memcpy(&(bytes[k]), tdps->rtypeArray, tdps->rtypeArray_size); |
---|
| 552 | k += tdps->rtypeArray_size; |
---|
[9ee2ce3] | 553 | |
---|
| 554 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 555 | { |
---|
| 556 | floatToBytes(exactMidBytesLength, tdps->minLogValue); |
---|
| 557 | for(i=0;i<4;i++) |
---|
| 558 | bytes[k++] = exactMidBytesLength[i]; |
---|
| 559 | } |
---|
| 560 | |
---|
[2c47b73] | 561 | memcpy(&(bytes[k]), tdps->typeArray, tdps->typeArray_size); |
---|
| 562 | k += tdps->typeArray_size; |
---|
| 563 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 564 | { |
---|
| 565 | memcpy(&(bytes[k]), tdps->pwrErrBoundBytes, tdps->pwrErrBoundBytes_size); |
---|
| 566 | k += tdps->pwrErrBoundBytes_size; |
---|
| 567 | } |
---|
| 568 | memcpy(&(bytes[k]), tdps->leadNumArray, tdps->leadNumArray_size); |
---|
| 569 | k += tdps->leadNumArray_size; |
---|
| 570 | memcpy(&(bytes[k]), tdps->exactMidBytes, tdps->exactMidBytes_size); |
---|
| 571 | k += tdps->exactMidBytes_size; |
---|
| 572 | if(tdps->residualMidBits!=NULL) |
---|
| 573 | { |
---|
| 574 | memcpy(&(bytes[k]), tdps->residualMidBits, tdps->residualMidBits_size); |
---|
| 575 | k += tdps->residualMidBits_size; |
---|
| 576 | } |
---|
| 577 | } |
---|
| 578 | |
---|
| 579 | //convert TightDataPointStorageD to bytes... |
---|
| 580 | void convertTDPStoFlatBytes_float(TightDataPointStorageF *tdps, unsigned char** bytes, size_t *size) |
---|
| 581 | { |
---|
| 582 | size_t i, k = 0; |
---|
| 583 | unsigned char dsLengthBytes[8]; |
---|
| 584 | |
---|
| 585 | if(exe_params->SZ_SIZE_TYPE==4) |
---|
| 586 | intToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//4 |
---|
| 587 | else |
---|
| 588 | longToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//8 |
---|
| 589 | |
---|
| 590 | unsigned char sameByte = tdps->allSameData==1?(unsigned char)1:(unsigned char)0; |
---|
| 591 | sameByte = sameByte | (confparams_cpr->szMode << 1); |
---|
| 592 | if(tdps->isLossless) |
---|
| 593 | sameByte = (unsigned char) (sameByte | 0x10); |
---|
| 594 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 595 | sameByte = (unsigned char) (sameByte | 0x20); // 00100000, the 5th bit |
---|
| 596 | if(exe_params->SZ_SIZE_TYPE==8) |
---|
| 597 | sameByte = (unsigned char) (sameByte | 0x40); // 01000000, the 6th bit |
---|
| 598 | |
---|
| 599 | if(tdps->allSameData==1) |
---|
| 600 | { |
---|
| 601 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + tdps->exactMidBytes_size; |
---|
| 602 | *bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 603 | |
---|
| 604 | for (i = 0; i < 3; i++)//3 |
---|
| 605 | (*bytes)[k++] = versionNumber[i]; |
---|
| 606 | (*bytes)[k++] = sameByte; |
---|
| 607 | |
---|
| 608 | convertSZParamsToBytes(confparams_cpr, &((*bytes)[k])); |
---|
| 609 | k = k + MetaDataByteLength; |
---|
| 610 | |
---|
| 611 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
---|
| 612 | (*bytes)[k++] = dsLengthBytes[i]; |
---|
| 613 | |
---|
| 614 | for (i = 0; i < tdps->exactMidBytes_size; i++) |
---|
| 615 | (*bytes)[k++] = tdps->exactMidBytes[i]; |
---|
| 616 | |
---|
| 617 | *size = totalByteLength; |
---|
| 618 | } |
---|
| 619 | else if (tdps->rtypeArray == NULL) |
---|
| 620 | { |
---|
| 621 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 622 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
[9ee2ce3] | 623 | int minLogValueSize = 0; |
---|
[2c47b73] | 624 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 625 | { |
---|
| 626 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 627 | radExpoL = 1; |
---|
| 628 | pwrBoundArrayL = 4; |
---|
[9ee2ce3] | 629 | minLogValueSize = 4; |
---|
[2c47b73] | 630 | } |
---|
| 631 | |
---|
| 632 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
[9ee2ce3] | 633 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + minLogValueSize |
---|
[2c47b73] | 634 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 635 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 636 | |
---|
| 637 | *bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 638 | |
---|
| 639 | convertTDPStoBytes_float(tdps, *bytes, dsLengthBytes, sameByte); |
---|
| 640 | |
---|
| 641 | *size = totalByteLength; |
---|
| 642 | } |
---|
| 643 | else //the case with reserved value |
---|
| 644 | { |
---|
| 645 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 646 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
[9ee2ce3] | 647 | int minLogValueSize = 0; |
---|
[2c47b73] | 648 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 649 | { |
---|
| 650 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 651 | radExpoL = 1; |
---|
| 652 | pwrBoundArrayL = 4; |
---|
[9ee2ce3] | 653 | minLogValueSize = 4; |
---|
[2c47b73] | 654 | } |
---|
| 655 | |
---|
| 656 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 657 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + 4 + tdps->rtypeArray_size |
---|
[9ee2ce3] | 658 | + minLogValueSize + tdps->typeArray_size + tdps->leadNumArray_size |
---|
[2c47b73] | 659 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 660 | |
---|
| 661 | sameByte = (unsigned char) (sameByte | 0x08); // 00001000, the 4th bit |
---|
| 662 | // denotes whether it is |
---|
| 663 | // with "reserved value" |
---|
| 664 | |
---|
| 665 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 666 | sameByte = (unsigned char) (sameByte | 0x10); // 00001000, the 5th bit |
---|
| 667 | |
---|
| 668 | *bytes = (unsigned char*)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 669 | |
---|
| 670 | convertTDPStoBytes_float_reserve(tdps, *bytes, dsLengthBytes, sameByte); |
---|
| 671 | |
---|
| 672 | *size = totalByteLength; |
---|
| 673 | } |
---|
| 674 | } |
---|
| 675 | |
---|
| 676 | void convertTDPStoFlatBytes_float_args(TightDataPointStorageF *tdps, unsigned char* bytes, size_t *size) |
---|
| 677 | { |
---|
| 678 | size_t i, k = 0; |
---|
| 679 | unsigned char dsLengthBytes[8]; |
---|
| 680 | |
---|
| 681 | if(exe_params->SZ_SIZE_TYPE==4) |
---|
| 682 | intToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//4 |
---|
| 683 | else |
---|
| 684 | longToBytes_bigEndian(dsLengthBytes, tdps->dataSeriesLength);//8 |
---|
| 685 | |
---|
| 686 | unsigned char sameByte = tdps->allSameData==1?(unsigned char)1:(unsigned char)0; |
---|
| 687 | sameByte = sameByte | (confparams_cpr->szMode << 1); |
---|
| 688 | if(tdps->isLossless) |
---|
| 689 | sameByte = (unsigned char) (sameByte | 0x10); |
---|
| 690 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 691 | sameByte = (unsigned char) (sameByte | 0x20); // 00100000, the 5th bit |
---|
| 692 | if(exe_params->SZ_SIZE_TYPE==8) |
---|
| 693 | sameByte = (unsigned char) (sameByte | 0x40); // 01000000, the 6th bit |
---|
| 694 | |
---|
| 695 | if(tdps->allSameData==1) |
---|
| 696 | { |
---|
| 697 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + tdps->exactMidBytes_size; |
---|
| 698 | //*bytes = (unsigned char *)malloc(sizeof(unsigned char)*totalByteLength); |
---|
| 699 | |
---|
| 700 | for (i = 0; i < 3; i++)//3 |
---|
| 701 | bytes[k++] = versionNumber[i]; |
---|
| 702 | bytes[k++] = sameByte; |
---|
| 703 | |
---|
| 704 | convertSZParamsToBytes(confparams_cpr, &(bytes[k])); |
---|
| 705 | k = k + MetaDataByteLength; |
---|
| 706 | |
---|
| 707 | for (i = 0; i < exe_params->SZ_SIZE_TYPE; i++) |
---|
| 708 | bytes[k++] = dsLengthBytes[i]; |
---|
| 709 | for (i = 0; i < tdps->exactMidBytes_size; i++) |
---|
| 710 | bytes[k++] = tdps->exactMidBytes[i]; |
---|
| 711 | |
---|
| 712 | *size = totalByteLength; |
---|
| 713 | } |
---|
| 714 | else if (tdps->rtypeArray == NULL) |
---|
| 715 | { |
---|
| 716 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 717 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 718 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 719 | { |
---|
| 720 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 721 | radExpoL = 1; |
---|
| 722 | pwrBoundArrayL = 4; |
---|
| 723 | } |
---|
| 724 | |
---|
| 725 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 726 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE |
---|
| 727 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 728 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 729 | |
---|
| 730 | convertTDPStoBytes_float(tdps, bytes, dsLengthBytes, sameByte); |
---|
| 731 | |
---|
| 732 | *size = totalByteLength; |
---|
| 733 | } |
---|
| 734 | else //the case with reserved value |
---|
| 735 | { |
---|
| 736 | size_t residualMidBitsLength = tdps->residualMidBits == NULL ? 0 : tdps->residualMidBits_size; |
---|
| 737 | size_t segmentL = 0, radExpoL = 0, pwrBoundArrayL = 0; |
---|
| 738 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 739 | { |
---|
| 740 | segmentL = exe_params->SZ_SIZE_TYPE; |
---|
| 741 | radExpoL = 1; |
---|
| 742 | pwrBoundArrayL = 4; |
---|
| 743 | } |
---|
| 744 | |
---|
| 745 | size_t totalByteLength = 3 + 1 + MetaDataByteLength + exe_params->SZ_SIZE_TYPE + 4 + radExpoL + segmentL + pwrBoundArrayL + 4 + 4 + 1 + 8 |
---|
| 746 | + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + exe_params->SZ_SIZE_TYPE + 4 + tdps->rtypeArray_size |
---|
| 747 | + tdps->typeArray_size + tdps->leadNumArray_size |
---|
| 748 | + tdps->exactMidBytes_size + residualMidBitsLength + tdps->pwrErrBoundBytes_size; |
---|
| 749 | |
---|
| 750 | sameByte = (unsigned char) (sameByte | 0x08); // 00001000, the 4th bit |
---|
| 751 | // denotes whether it is |
---|
| 752 | // with "reserved value" |
---|
| 753 | |
---|
| 754 | if(confparams_cpr->errorBoundMode>=PW_REL) |
---|
| 755 | sameByte = (unsigned char) (sameByte | 0x10); // 00001000, the 5th bit |
---|
| 756 | |
---|
| 757 | convertTDPStoBytes_float_reserve(tdps, bytes, dsLengthBytes, sameByte); |
---|
| 758 | |
---|
| 759 | *size = totalByteLength; |
---|
| 760 | } |
---|
| 761 | } |
---|
| 762 | |
---|
| 763 | /** |
---|
| 764 | * to free the memory used in the compression |
---|
| 765 | * */ |
---|
| 766 | void free_TightDataPointStorageF(TightDataPointStorageF *tdps) |
---|
[9ee2ce3] | 767 | { |
---|
[2c47b73] | 768 | if(tdps->rtypeArray!=NULL) |
---|
| 769 | free(tdps->rtypeArray); |
---|
| 770 | if(tdps->typeArray!=NULL) |
---|
| 771 | free(tdps->typeArray); |
---|
| 772 | if(tdps->leadNumArray!=NULL) |
---|
| 773 | free(tdps->leadNumArray); |
---|
| 774 | if(tdps->exactMidBytes!=NULL) |
---|
| 775 | free(tdps->exactMidBytes); |
---|
| 776 | if(tdps->residualMidBits!=NULL) |
---|
| 777 | free(tdps->residualMidBits); |
---|
| 778 | if(tdps->pwrErrBoundBytes!=NULL) |
---|
| 779 | free(tdps->pwrErrBoundBytes); |
---|
| 780 | free(tdps); |
---|
| 781 | } |
---|
| 782 | |
---|
| 783 | /** |
---|
| 784 | * to free the memory used in the decompression |
---|
| 785 | * */ |
---|
| 786 | void free_TightDataPointStorageF2(TightDataPointStorageF *tdps) |
---|
| 787 | { |
---|
| 788 | free(tdps); |
---|
| 789 | } |
---|